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Q1RJR7 (RADA_RICBR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA repair protein RadA homolog
Alternative name(s):
DNA repair protein Sms homolog
Gene names
Name:radA
Ordered Locus Names:RBE_0316
OrganismRickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]
Taxonomic identifier336407 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May play a role in the repair of endogenous alkylation damage By similarity.

Sequence similarities

Belongs to the RecA family. RadA subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 448448DNA repair protein RadA homolog
PRO_0000286659

Regions

Zinc finger10 – 2718C4-type Potential
Nucleotide binding91 – 988ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q1RJR7 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: D4F2DDDF1E82C3B8

FASTA44848,450
        10         20         30         40         50         60 
MTKEKKHYIC SNCGNTSPKW SGQCFDCGVW GSIIEEKVIS NKNIAKIGSK QDFEQLSSNV 

        70         80         90        100        110        120 
TDQVRISTPI GELDRVLGGG LVLGSAILIG GDPGIGKSTL LLQLVAGSFA SKVKCLYITG 

       130        140        150        160        170        180 
EESLDQIKLR ALRLDLVNDK TNILAANNLE DIIASLEANK GNIDLVVIDS IQTIATRELT 

       190        200        210        220        230        240 
SPPGTVSQIR TCAHELVNYA KQNNIIILLS CHVTKDGQLA GPKLLEHLVD TVLYFEGDHN 

       250        260        270        280        290        300 
NHFRILRSYK NRFGGVGEIG VFEMSSSGLI EVTNPSELFL MKREQNVIGT AIFAGIEGSR 

       310        320        330        340        350        360 
PLLMEVQALI VPSNMVTPRR SAVGWDVNRL SMILAVLSSR IGLNLANYEV YLSIAGGLKI 

       370        380        390        400        410        420 
NEPASDLAVA ASLISAATNK PLPEHSVFFG EISLSGEIRK TAKAEARIKE ALKLGFNNII 

       430        440 
CSKSENLTHD FISSIAHLKD LKLLLGSS 

« Hide

References

[1]"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RML369-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000087 Genomic DNA. Translation: ABE04397.1.
RefSeqYP_537486.1. NC_007940.1.

3D structure databases

ProteinModelPortalQ1RJR7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING336407.RBE_0316.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE04397; ABE04397; RBE_0316.
GeneID3996290.
KEGGrbe:RBE_0316.
PATRIC17881953. VBIRicBel102610_0356.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1066.
HOGENOMHOG000218329.
KOK04485.
OMAVLEHAID.
OrthoDBEOG6DRPHC.

Enzyme and pathway databases

BioCycRBEL336407:GJCY-322-MONOMER.

Family and domain databases

Gene3D3.30.230.10. 1 hit.
3.40.50.300. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR004504. DNA_repair_RadA.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PRINTSPR01874. DNAREPAIRADA.
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
SSF54211. SSF54211. 2 hits.
TIGRFAMsTIGR00416. sms. 1 hit.
PROSITEPS50162. RECA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRADA_RICBR
AccessionPrimary (citable) accession number: Q1RJR7
Entry history
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia bellii strain RML369-C

Rickettsia bellii (strain RML369-C): entries and gene names