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Protein

Endolytic peptidoglycan transglycosylase RlpA

Gene

rlpA

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Cell wall biogenesis/degradation

Names & Taxonomyi

Protein namesi
Recommended name:
Endolytic peptidoglycan transglycosylase RlpAUniRule annotation (EC:4.2.2.-UniRule annotation)
Gene namesi
Name:rlpAUniRule annotation
Ordered Locus Names:RBE_0322
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
Proteomesi
  • UP000001951 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Lipid-anchor UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21UniRule annotationAdd BLAST21
ChainiPRO_000028082622 – 227Endolytic peptidoglycan transglycosylase RlpAUniRule annotationAdd BLAST206

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi22N-palmitoyl cysteineUniRule annotation1
Lipidationi22S-diacylglycerol cysteineUniRule annotation1

Keywords - PTMi

Lipoprotein, Palmitate

Structurei

3D structure databases

ProteinModelPortaliQ1RJR1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RlpA family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000254768.
KOiK03642.
OMAiDGFHGKK.
OrthoDBiPOG091H0610.

Family and domain databases

HAMAPiMF_02071. RlpA. 1 hit.
InterProiIPR009009. RlpA-like_DPBB.
IPR012997. RplA.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q1RJR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNHKFVLLI LLIFYCFFLS GCNNSKKTPC SRKHSHKELS KDDPHNLVYK
60 70 80 90 100
GYYKVGSQYK IKGKTYKPNA PKSFTETGYA SWYGGGGDKF HGKKTANGDM
110 120 130 140 150
FNKNLLTAAH KTLPLPCLVK VTNKTNNKSV ILMVNDRGPF KPNRIIDVSA
160 170 180 190 200
KAAEVLAFKK QGLAKVKIEY LHAETEKFLK NIKVNKSSNK TLAKSSKKPS
210 220
STKVANNKCS INCHIKLVNL KYKLAVN
Length:227
Mass (Da):25,462
Last modified:May 16, 2006 - v1
Checksum:i474DF2682EC1A63A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04403.1.

Genome annotation databases

EnsemblBacteriaiABE04403; ABE04403; RBE_0322.
KEGGirbe:RBE_0322.
PATRICi17881965. VBIRicBel102610_0362.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04403.1.

3D structure databases

ProteinModelPortaliQ1RJR1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE04403; ABE04403; RBE_0322.
KEGGirbe:RBE_0322.
PATRICi17881965. VBIRicBel102610_0362.

Phylogenomic databases

HOGENOMiHOG000254768.
KOiK03642.
OMAiDGFHGKK.
OrthoDBiPOG091H0610.

Family and domain databases

HAMAPiMF_02071. RlpA. 1 hit.
InterProiIPR009009. RlpA-like_DPBB.
IPR012997. RplA.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
TIGRFAMsiTIGR00413. rlpA. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRLPA_RICBR
AccessioniPrimary (citable) accession number: Q1RJR1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: May 16, 2006
Last modified: November 30, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.