Q1RIQ2 (Q1RIQ2_RICBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polypeptide deformylase EMBL ABE04762.1
EC=3.5.1.88 EMBL ABE04762.1

Gene names

Name:	def2 EMBL ABE04762.1
Ordered Locus Names:	RBE_0681

Organism

Rickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP] EMBL ABE04762.1

Taxonomic identifier

336407 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia

Protein attributes

Sequence length	183 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity

Formyl-L-methionyl peptide + H2O = formate + methionyl peptide. SAAS SAAS000181

Ontologies

Keywords
Biological process	Protein biosynthesis SAAS SAAS000181
Ligand	Metal-binding SAAS SAAS000181
Molecular function	Hydrolase SAAS SAAS000181 EMBL ABE04762.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	iron ion binding Inferred from electronic annotation. Source: InterPro peptide deformylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1RIQ2 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 752E894C9F105DEA	FASTA	183	21,115
	10 20 30 40 50 60 MNQEKPYYQI VYAPNDIFKK QGELIEVVDD NIRTIIDKML NTMQIERAVG LGANMVGILK 70 80 90 100 110 120 RIAVVDLHEN NKSSPIIFIN PEITYFSSDK QTFMERSLSF PGIEAPITRS KAIKINYLDY 130 140 150 160 170 180 HGNKQELEAQ DFLATVIQHE VDYLNGKVFL DHLSKLKRDT LLKKMLKYIK MHPPHVHGSS CKH

References

[1]

"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens." Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D. PLoS Genet. 2:733-744(2006) [PubMed: 16703114] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000087 Genomic DNA. Translation: ABE04762.1.
RefSeq	YP_537851.1. NC_007940.1.
3D structure databases
ProteinModelPortal	Q1RIQ2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1RIQ2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3995209.
GenomeReviews	Gene locus RBE_0681 in contig CP000087_GR.
KEGG	rbe:RBE_0681.
PATRIC	17882834. VBIRicBel102610_0782.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0242.
HOGENOM	HBG665227.
OMA	QHQIDHL.
ProtClustDB	CLSK882046.
Enzyme and pathway databases
BioCyc	RBEL336407:RBE_0681-MONOMER.
Family and domain databases
HAMAP	MF_00163. Pep_deformylase. [Tree]
InterPro	IPR000181. Fmet_deformylase. IPR023635. Peptide_deformylase. [Graphical view]
Gene3D	G3DSA:3.90.45.10. Fmet_deformylase. 1 hit.
KO	K01462.
PANTHER	PTHR10458. Fmet_deformylase. 1 hit.
Pfam	PF01327. Pep_deformylase. 1 hit. [Graphical view]
PIRSF	PIRSF004749. Pep_def. 1 hit.
PRINTS	PR01576. PDEFORMYLASE.
SUPFAM	SSF56420. Fmet_deformylase. 1 hit.
TIGRFAMs	TIGR00079. Pept_deformyl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1RIQ2_RICBR

Accession

Primary (citable) accession number: Q1RIQ2

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)