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Protein

UPF0092 membrane protein RBE_0701

Gene

RBE_0701

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-722-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0092 membrane protein RBE_0701
Gene namesi
Ordered Locus Names:RBE_0701
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei34 – 5421HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 146146UPF0092 membrane protein RBE_0701PRO_0000282377Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_0701.

Structurei

3D structure databases

ProteinModelPortaliQ1RIN2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiTSLIPMI.
OrthoDBiEOG6WQDDS.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RIN2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSTNGQDSNA NNNDTIEIQE TEVVPVETTN SLQSGLTSLI PMVLIFAVFY
60 70 80 90 100
FLLLRPQEKR RKEREKLVSE VKKGEEVLTN SGIYGIVTKV SESEPNIEVE
110 120 130 140
IAKDVRIKAL KSAIVDITSR SKDVAVKKED SKNNKKDKKV SGAKSS
Length:146
Mass (Da):16,182
Last modified:May 16, 2006 - v1
Checksum:iDC369D468B9AFC7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04782.1.
RefSeqiWP_011477369.1. NC_007940.1.
YP_537871.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE04782; ABE04782; RBE_0701.
GeneIDi3995301.
KEGGirbe:RBE_0701.
PATRICi17882880. VBIRicBel102610_0805.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE04782.1.
RefSeqiWP_011477369.1. NC_007940.1.
YP_537871.1. NC_007940.1.

3D structure databases

ProteinModelPortaliQ1RIN2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi336407.RBE_0701.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE04782; ABE04782; RBE_0701.
GeneIDi3995301.
KEGGirbe:RBE_0701.
PATRICi17882880. VBIRicBel102610_0805.

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiTSLIPMI.
OrthoDBiEOG6WQDDS.

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-722-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiY701_RICBR
AccessioniPrimary (citable) accession number: Q1RIN2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: May 16, 2006
Last modified: January 7, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.