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Q1RIC6

- RUVX_RICBR

UniProt

Q1RIC6 - RUVX_RICBR

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Protein

Putative Holliday junction resolvase

Gene
RBE_0807
Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Could be a nuclease that resolves Holliday junction intermediates in genetic recombination By similarity.UniRule annotation

GO - Molecular functioni

  1. nuclease activity Source: UniProtKB-KW
  2. nucleic acid binding Source: InterPro

GO - Biological processi

  1. DNA recombination Source: UniProtKB-KW
  2. DNA repair Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Nuclease

Keywords - Biological processi

DNA damage, DNA recombination, DNA repair

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-829-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative Holliday junction resolvase (EC:3.1.-.-)
Gene namesi
Ordered Locus Names:RBE_0807
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951: Chromosome

Subcellular locationi

Cytoplasm Reviewed prediction UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 154154Putative Holliday junction resolvaseUniRule annotationPRO_0000257581Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_0807.

Structurei

3D structure databases

ProteinModelPortaliQ1RIC6.

Family & Domainsi

Sequence similaritiesi

Belongs to the YqgF HJR family.

Phylogenomic databases

eggNOGiCOG0816.
HOGENOMiHOG000016953.
KOiK07447.
OMAiAVILQGW.
OrthoDBiEOG6N94FV.

Family and domain databases

Gene3Di3.30.420.140. 1 hit.
HAMAPiMF_00651. HJR_YqgF.
InterProiIPR005227. Resolv_Hlld_junc_YqgF-like.
IPR012337. RNaseH-like_dom.
IPR006641. YqgF/RNaseH-like_dom.
[Graphical view]
PfamiPF03652. UPF0081. 1 hit.
[Graphical view]
SMARTiSM00732. YqgFc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
TIGRFAMsiTIGR00250. RNAse_H_YqgF. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RIC6-1 [UniParc]FASTAAdd to Basket

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MIINNLQEFY RLLLPNAPLI SIDYGSKKIG IAISNQERNI AMPLNIITEA    50
SKKAIIASLL EKIEQYKACG IVIGLPIDMS GMQTEQSAIV IKFAEELTKS 100
INLPIYLQDE RLTTKAANNF LKSFGIKRKE RNNNDDAVAA SMILETVLNS 150
INKL 154
Length:154
Mass (Da):17,138
Last modified:May 16, 2006 - v1
Checksum:i270A53CE4E4F7E4E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000087 Genomic DNA. Translation: ABE04888.1.
RefSeqiYP_537977.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE04888; ABE04888; RBE_0807.
GeneIDi3996270.
KEGGirbe:RBE_0807.
PATRICi17883113. VBIRicBel102610_0920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000087 Genomic DNA. Translation: ABE04888.1 .
RefSeqi YP_537977.1. NC_007940.1.

3D structure databases

ProteinModelPortali Q1RIC6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 336407.RBE_0807.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE04888 ; ABE04888 ; RBE_0807 .
GeneIDi 3996270.
KEGGi rbe:RBE_0807.
PATRICi 17883113. VBIRicBel102610_0920.

Phylogenomic databases

eggNOGi COG0816.
HOGENOMi HOG000016953.
KOi K07447.
OMAi AVILQGW.
OrthoDBi EOG6N94FV.

Enzyme and pathway databases

BioCyci RBEL336407:GJCY-829-MONOMER.

Family and domain databases

Gene3Di 3.30.420.140. 1 hit.
HAMAPi MF_00651. HJR_YqgF.
InterProi IPR005227. Resolv_Hlld_junc_YqgF-like.
IPR012337. RNaseH-like_dom.
IPR006641. YqgF/RNaseH-like_dom.
[Graphical view ]
Pfami PF03652. UPF0081. 1 hit.
[Graphical view ]
SMARTi SM00732. YqgFc. 1 hit.
[Graphical view ]
SUPFAMi SSF53098. SSF53098. 1 hit.
TIGRFAMsi TIGR00250. RNAse_H_YqgF. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiRUVX_RICBR
AccessioniPrimary (citable) accession number: Q1RIC6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi