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Q1RIC6

- RUVX_RICBR

UniProt

Q1RIC6 - RUVX_RICBR

Protein

Putative Holliday junction resolvase

Gene

RBE_0807

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (16 May 2006)
      Previous versions | rss
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    Functioni

    Could be a nuclease that resolves Holliday junction intermediates in genetic recombination.UniRule annotation

    GO - Molecular functioni

    1. nuclease activity Source: UniProtKB-KW
    2. nucleic acid binding Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: UniProtKB-KW
    2. DNA repair Source: UniProtKB-KW

    Keywords - Molecular functioni

    Hydrolase, Nuclease

    Keywords - Biological processi

    DNA damage, DNA recombination, DNA repair

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-829-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative Holliday junction resolvaseUniRule annotation (EC:3.1.-.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:RBE_0807
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 154154Putative Holliday junction resolvasePRO_0000257581Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi336407.RBE_0807.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RIC6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the YqgF HJR family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0816.
    HOGENOMiHOG000016953.
    KOiK07447.
    OMAiAVILQGW.
    OrthoDBiEOG6N94FV.

    Family and domain databases

    Gene3Di3.30.420.140. 1 hit.
    HAMAPiMF_00651. HJR_YqgF.
    InterProiIPR005227. Resolv_Hlld_junc_YqgF-like.
    IPR012337. RNaseH-like_dom.
    IPR006641. YqgF/RNaseH-like_dom.
    [Graphical view]
    PfamiPF03652. UPF0081. 1 hit.
    [Graphical view]
    SMARTiSM00732. YqgFc. 1 hit.
    [Graphical view]
    SUPFAMiSSF53098. SSF53098. 1 hit.
    TIGRFAMsiTIGR00250. RNAse_H_YqgF. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q1RIC6-1 [UniParc]FASTAAdd to Basket

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    MIINNLQEFY RLLLPNAPLI SIDYGSKKIG IAISNQERNI AMPLNIITEA    50
    SKKAIIASLL EKIEQYKACG IVIGLPIDMS GMQTEQSAIV IKFAEELTKS 100
    INLPIYLQDE RLTTKAANNF LKSFGIKRKE RNNNDDAVAA SMILETVLNS 150
    INKL 154
    Length:154
    Mass (Da):17,138
    Last modified:May 16, 2006 - v1
    Checksum:i270A53CE4E4F7E4E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04888.1.
    RefSeqiYP_537977.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE04888; ABE04888; RBE_0807.
    GeneIDi3996270.
    KEGGirbe:RBE_0807.
    PATRICi17883113. VBIRicBel102610_0920.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE04888.1 .
    RefSeqi YP_537977.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RIC6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_0807.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE04888 ; ABE04888 ; RBE_0807 .
    GeneIDi 3996270.
    KEGGi rbe:RBE_0807.
    PATRICi 17883113. VBIRicBel102610_0920.

    Phylogenomic databases

    eggNOGi COG0816.
    HOGENOMi HOG000016953.
    KOi K07447.
    OMAi AVILQGW.
    OrthoDBi EOG6N94FV.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-829-MONOMER.

    Family and domain databases

    Gene3Di 3.30.420.140. 1 hit.
    HAMAPi MF_00651. HJR_YqgF.
    InterProi IPR005227. Resolv_Hlld_junc_YqgF-like.
    IPR012337. RNaseH-like_dom.
    IPR006641. YqgF/RNaseH-like_dom.
    [Graphical view ]
    Pfami PF03652. UPF0081. 1 hit.
    [Graphical view ]
    SMARTi SM00732. YqgFc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53098. SSF53098. 1 hit.
    TIGRFAMsi TIGR00250. RNAse_H_YqgF. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiRUVX_RICBR
    AccessioniPrimary (citable) accession number: Q1RIC6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3