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Q1RHX7

- CYCM_RICBR

UniProt

Q1RHX7 - CYCM_RICBR

Protein

Cytochrome c homolog

Gene

cycM

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (16 May 2006)
      Previous versions | rss
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    Functioni

    May be involved in electron transfer from bc1 complex to aa3.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei82 – 821Heme (covalent)PROSITE-ProRule annotation
    Binding sitei85 – 851Heme (covalent)PROSITE-ProRule annotation
    Metal bindingi86 – 861Iron (heme axial ligand)PROSITE-ProRule annotation
    Metal bindingi148 – 1481Iron (heme axial ligand)PROSITE-ProRule annotation

    GO - Molecular functioni

    1. electron carrier activity Source: InterPro
    2. heme binding Source: InterPro
    3. iron ion binding Source: InterPro

    GO - Biological processi

    1. oxidation-reduction process Source: UniProtKB-KW

    Keywords - Biological processi

    Electron transport, Transport

    Keywords - Ligandi

    Heme, Iron, Metal-binding

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-981-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Cytochrome c homolog
    Gene namesi
    Name:cycM
    Ordered Locus Names:RBE_0956
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 173173Cytochrome c homologPRO_0000288755Add
    BLAST

    Post-translational modificationi

    Binds 1 heme group per subunit.By similarity

    Interactioni

    Protein-protein interaction databases

    STRINGi336407.RBE_0956.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RHX7.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 88CytoplasmicSequence Analysis
    Topological domaini30 – 173144PeriplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei9 – 2921Helical; Signal-anchorSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the cytochrome c family.Curated

    Keywords - Domaini

    Signal-anchor, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG3474.
    HOGENOMiHOG000009763.
    KOiK08738.
    OMAiNYSKAML.
    OrthoDBiEOG6MM1PX.

    Family and domain databases

    Gene3Di1.10.760.10. 1 hit.
    InterProiIPR009056. Cyt_c-like_dom.
    IPR002327. Cyt_c_1A/1B.
    IPR003088. Cyt_c_dom.
    [Graphical view]
    PANTHERiPTHR11961. PTHR11961. 1 hit.
    PfamiPF00034. Cytochrom_C. 1 hit.
    [Graphical view]
    PRINTSiPR00604. CYTCHRMECIAB.
    SUPFAMiSSF46626. SSF46626. 1 hit.
    PROSITEiPS51007. CYTC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1RHX7-1 [UniParc]FASTAAdd to Basket

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    MSGKELNKIV AAILFASLIA MMVGFIANIL YKPVLEPKHR GYSIAVQEVS    50
    EAPTTQAQAP INIPELMKTA NADNGREIAK KCLMCHSLDK DGPNKIGPHL 100
    WDVAGRPKAS ITDYKYSPAL SALGGNWDDD SLFAFLHKPS SYAPGTKMSF 150
    AGISKPQDIA DVILFLKTYV HDK 173
    Length:173
    Mass (Da):18,831
    Last modified:May 16, 2006 - v1
    Checksum:iE7BB19C8EFADCF72
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05037.1.
    RefSeqiYP_538126.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE05037; ABE05037; RBE_0956.
    GeneIDi3995672.
    KEGGirbe:RBE_0956.
    PATRICi17883449. VBIRicBel102610_1085.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05037.1 .
    RefSeqi YP_538126.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RHX7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_0956.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE05037 ; ABE05037 ; RBE_0956 .
    GeneIDi 3995672.
    KEGGi rbe:RBE_0956.
    PATRICi 17883449. VBIRicBel102610_1085.

    Phylogenomic databases

    eggNOGi COG3474.
    HOGENOMi HOG000009763.
    KOi K08738.
    OMAi NYSKAML.
    OrthoDBi EOG6MM1PX.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-981-MONOMER.

    Family and domain databases

    Gene3Di 1.10.760.10. 1 hit.
    InterProi IPR009056. Cyt_c-like_dom.
    IPR002327. Cyt_c_1A/1B.
    IPR003088. Cyt_c_dom.
    [Graphical view ]
    PANTHERi PTHR11961. PTHR11961. 1 hit.
    Pfami PF00034. Cytochrom_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00604. CYTCHRMECIAB.
    SUPFAMi SSF46626. SSF46626. 1 hit.
    PROSITEi PS51007. CYTC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiCYCM_RICBR
    AccessioniPrimary (citable) accession number: Q1RHX7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 29, 2007
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3