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Protein

Cytochrome c homolog

Gene

cycM

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

May be involved in electron transfer from bc1 complex to aa3.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei82Heme (covalent)PROSITE-ProRule annotation1
Binding sitei85Heme (covalent)PROSITE-ProRule annotation1
Metal bindingi86Iron (heme axial ligand)PROSITE-ProRule annotation1
Metal bindingi148Iron (heme axial ligand)PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome c homolog
Gene namesi
Name:cycM
Ordered Locus Names:RBE_0956
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
Proteomesi
  • UP000001951 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 8CytoplasmicSequence analysis8
Transmembranei9 – 29Helical; Signal-anchorSequence analysisAdd BLAST21
Topological domaini30 – 173PeriplasmicSequence analysisAdd BLAST144

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002887551 – 173Cytochrome c homologAdd BLAST173

Post-translational modificationi

Binds 1 heme group per subunit.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ1RHX7.
SMRiQ1RHX7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome c family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000009763.
KOiK08738.
OMAiNYSKAML.
OrthoDBiPOG091H0NLN.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002327. Cyt_c_1A/1B.
[Graphical view]
PANTHERiPTHR11961. PTHR11961. 1 hit.
PfamiPF00034. Cytochrom_C. 1 hit.
[Graphical view]
PRINTSiPR00604. CYTCHRMECIAB.
SUPFAMiSSF46626. SSF46626. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1RHX7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGKELNKIV AAILFASLIA MMVGFIANIL YKPVLEPKHR GYSIAVQEVS
60 70 80 90 100
EAPTTQAQAP INIPELMKTA NADNGREIAK KCLMCHSLDK DGPNKIGPHL
110 120 130 140 150
WDVAGRPKAS ITDYKYSPAL SALGGNWDDD SLFAFLHKPS SYAPGTKMSF
160 170
AGISKPQDIA DVILFLKTYV HDK
Length:173
Mass (Da):18,831
Last modified:May 16, 2006 - v1
Checksum:iE7BB19C8EFADCF72
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05037.1.
RefSeqiWP_011477618.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE05037; ABE05037; RBE_0956.
KEGGirbe:RBE_0956.
PATRICi17883449. VBIRicBel102610_1085.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05037.1.
RefSeqiWP_011477618.1. NC_007940.1.

3D structure databases

ProteinModelPortaliQ1RHX7.
SMRiQ1RHX7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE05037; ABE05037; RBE_0956.
KEGGirbe:RBE_0956.
PATRICi17883449. VBIRicBel102610_1085.

Phylogenomic databases

HOGENOMiHOG000009763.
KOiK08738.
OMAiNYSKAML.
OrthoDBiPOG091H0NLN.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002327. Cyt_c_1A/1B.
[Graphical view]
PANTHERiPTHR11961. PTHR11961. 1 hit.
PfamiPF00034. Cytochrom_C. 1 hit.
[Graphical view]
PRINTSiPR00604. CYTCHRMECIAB.
SUPFAMiSSF46626. SSF46626. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCYCM_RICBR
AccessioniPrimary (citable) accession number: Q1RHX7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 16, 2006
Last modified: November 2, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.