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Protein

Transcription termination/antitermination protein NusG

Gene

nusG

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Participates in transcription elongation, termination and antitermination.UniRule annotation

GO - Biological processi

  1. DNA-templated transcription, elongation Source: UniProtKB-HAMAP
  2. DNA-templated transcription, termination Source: UniProtKB-HAMAP
  3. regulation of DNA-templated transcription, elongation Source: InterPro
  4. transcription antitermination Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription antitermination, Transcription regulation, Transcription termination

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1192-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription termination/antitermination protein NusGUniRule annotation
Gene namesi
Name:nusGUniRule annotation
Ordered Locus Names:RBE_1158
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 190190Transcription termination/antitermination protein NusGPRO_0000288746Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_1158.

Structurei

3D structure databases

ProteinModelPortaliQ1RHC5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini138 – 16629KOWUniRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the NusG family.UniRule annotation
Contains 1 KOW domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG0250.
HOGENOMiHOG000219264.
KOiK02601.
OMAiNRIFKRA.
OrthoDBiEOG6FFS95.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
3.30.70.940. 1 hit.
HAMAPiMF_00948. NusG.
InterProiIPR005824. KOW.
IPR006645. NGN_dom.
IPR014722. Rib_L2_dom2.
IPR001062. Transcrpt_antiterm_NusG.
IPR015869. Transcrpt_antiterm_NusG_bac_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSiPR00338. NUSGTNSCPFCT.
SMARTiSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
SSF82679. SSF82679. 1 hit.
TIGRFAMsiTIGR00922. nusG. 1 hit.
PROSITEiPS01014. NUSG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1RHC5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEQNIDDIL SNSEKDTKKW YVIHTASGAE NRIKRIMLER ISKQKMSDFF
60 70 80 90 100
DDILVPVFGV SEVKRSKNVK VEKKLMPSYI LIKMNMTDKS WHLVKNIPGV
110 120 130 140 150
TGFLGSKTTP KALTESEIQN IRLETEAKEA KDAKLYEVGE IVTVTEGPFE
160 170 180 190
TFTGTVEEVD QEKARLKVSV SIFGKATPIE LSFTQVKKND
Length:190
Mass (Da):21,502
Last modified:May 16, 2006 - v1
Checksum:iD43953506E55A8DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05239.1.
RefSeqiYP_538328.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE05239; ABE05239; RBE_1158.
GeneIDi3995115.
KEGGirbe:RBE_1158.
PATRICi17883913. VBIRicBel102610_1308.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05239.1.
RefSeqiYP_538328.1. NC_007940.1.

3D structure databases

ProteinModelPortaliQ1RHC5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi336407.RBE_1158.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE05239; ABE05239; RBE_1158.
GeneIDi3995115.
KEGGirbe:RBE_1158.
PATRICi17883913. VBIRicBel102610_1308.

Phylogenomic databases

eggNOGiCOG0250.
HOGENOMiHOG000219264.
KOiK02601.
OMAiNRIFKRA.
OrthoDBiEOG6FFS95.

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1192-MONOMER.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
3.30.70.940. 1 hit.
HAMAPiMF_00948. NusG.
InterProiIPR005824. KOW.
IPR006645. NGN_dom.
IPR014722. Rib_L2_dom2.
IPR001062. Transcrpt_antiterm_NusG.
IPR015869. Transcrpt_antiterm_NusG_bac_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF00467. KOW. 1 hit.
PF02357. NusG. 1 hit.
[Graphical view]
PRINTSiPR00338. NUSGTNSCPFCT.
SMARTiSM00739. KOW. 1 hit.
SM00738. NGN. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
SSF82679. SSF82679. 1 hit.
TIGRFAMsiTIGR00922. nusG. 1 hit.
PROSITEiPS01014. NUSG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiNUSG_RICBR
AccessioniPrimary (citable) accession number: Q1RHC5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 16, 2006
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.