Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1RHB9 (SDHA_RICBR) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Succinate dehydrogenase flavoprotein subunit

EC=1.3.5.1
Gene names
Name:sdhA
Ordered Locus Names:RBE_1164
OrganismRickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]
Taxonomic identifier336407 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group

Protein attributes

Sequence length596 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Succinate + a quinone = fumarate + a quinol.

Cofactor

FAD.

Pathway

Carbohydrate metabolism; tricarboxylic acid cycle; fumarate from succinate (bacterial route): step 1/1.

Subunit structure

Part of an enzyme complex containing four subunits: a flavoprotein, an iron-sulfur, cytochrome b-556, and a hydrophobic anchor protein.

Subcellular location

Cell inner membrane; Peripheral membrane protein; Cytoplasmic side.

Sequence similarities

Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 596596Succinate dehydrogenase flavoprotein subunit
PRO_0000280976

Regions

Nucleotide binding18 – 236FAD By similarity
Nucleotide binding41 – 5616FAD By similarity
Nucleotide binding407 – 4082FAD By similarity

Sites

Active site2901Proton acceptor By similarity
Binding site2251FAD By similarity
Binding site2461Substrate By similarity
Binding site2581Substrate By similarity
Binding site3571Substrate By similarity
Binding site3911FAD By similarity
Binding site4021Substrate By similarity

Amino acid modifications

Modified residue491Tele-8alpha-FAD histidine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q1RHB9 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: F3A2C76895400AF4

FASTA59665,106
        10         20         30         40         50         60 
MTKSYNIIHH KFDVIVVGAG GAGLRAAFGM AEEGLNTACI SKLFPTRSHT VAAQGGISAA 

        70         80         90        100        110        120 
LGNMGADDWR WHMYDTVKGS DWLGDQDAIE YMCKNAPDAI LELEHYGVPF SRTEEGKIYQ 

       130        140        150        160        170        180 
RPFGGMTTEY GKGKAAQRTC AAADRTGHAI LHTLYQQSLK HKVQFFIEYF AIDLLMENGE 

       190        200        210        220        230        240 
CRGVVAWNLD DGSLHCFRAH NVVLATGGYG RAYFSATSAH TCTGDGGGMA IRAGLPLQDM 

       250        260        270        280        290        300 
EFVQFHPTGI YSAGCLITEG ARGEGGYLVN ANGERFMERY APAAKDLASR DVVSRAMTIE 

       310        320        330        340        350        360 
IREGRGVGEH KDHVFLHLNH LSPEIVHSRL PGISETAKIF AGVDVTKEPI PVLPTVHYNM 

       370        380        390        400        410        420 
GGIPTNYHGQ VIIKDGKNHN SVVKGLMSIG EAACVSVHGA NRLGSNSLLD LVVFGRSAAL 

       430        440        450        460        470        480 
KAAELIKPAS PHKPVSEEAL EKIISRFDKI RHSSGNISVA DLRLKMQRTM QSHASVFRTQ 

       490        500        510        520        530        540 
EVLDEGAEMI SEIRSGYKDI KVNDKSLIWN SDLVEALELD NLLDQALVTV YSAAARKESR 

       550        560        570        580        590 
GAHAREDYPD RNDKEWMQHT LSGVDEAGKV VLDYKPVTLT TLSDEVKAIP PAKRVY 

« Hide

References

[1]"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RML369-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000087 Genomic DNA. Translation: ABE05245.1.
RefSeqYP_538334.1. NC_007940.1.

3D structure databases

ProteinModelPortalQ1RHB9.
SMRQ1RHB9. Positions 5-596.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING336407.RBE_1164.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE05245; ABE05245; RBE_1164.
GeneID3995942.
KEGGrbe:RBE_1164.
PATRIC17883927. VBIRicBel102610_1314.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1053.
HOGENOMHOG000160475.
KOK00239.
OMASYRPVHV.
OrthoDBEOG6M3PC4.

Enzyme and pathway databases

BioCycRBEL336407:GJCY-1199-MONOMER.
UniPathwayUPA00223; UER01005.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSDHA_RICBR
AccessionPrimary (citable) accession number: Q1RHB9
Entry history
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia bellii strain RML369-C

Rickettsia bellii (strain RML369-C): entries and gene names

PATHWAY comments

Index of metabolic and biosynthesis pathways