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Protein

Protein translocase subunit SecF

Gene

secF

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, Translocation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein translocase subunit SecF
Gene namesi
Name:secFUniRule annotation
Ordered Locus Names:RBE_1184
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
Proteomesi
  • UP000001951 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei28 – 48HelicalUniRule annotationAdd BLAST21
Transmembranei140 – 160HelicalUniRule annotationAdd BLAST21
Transmembranei164 – 184HelicalUniRule annotationAdd BLAST21
Transmembranei194 – 214HelicalUniRule annotationAdd BLAST21
Transmembranei246 – 266HelicalUniRule annotationAdd BLAST21
Transmembranei272 – 292HelicalUniRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002726371 – 303Protein translocase subunit SecFAdd BLAST303

Interactioni

Subunit structurei

Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ1RH99
SMRiQ1RH99
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SecD/SecF family. SecF subfamily.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000245916
KOiK03074
OMAiVNQTLMR
OrthoDBiPOG091H02G4

Family and domain databases

HAMAPiMF_01464_B SecF_B, 1 hit
InterProiView protein in InterPro
IPR022813 SecD/SecF_arch_bac
IPR022645 SecD/SecF_bac
IPR022646 SecD/SecF_CS
IPR005665 SecF_bac
IPR000731 SSD
PfamiView protein in Pfam
PF07549 Sec_GG, 1 hit
PF02355 SecD_SecF, 1 hit
PRINTSiPR01755 SECFTRNLCASE
TIGRFAMsiTIGR00916 2A0604s01, 1 hit
TIGR00966 3a0501s07, 1 hit
PROSITEiView protein in PROSITE
PS50156 SSD, 1 hit

Sequencei

Sequence statusi: Complete.

Q1RH99-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIYPLRLLP NKIDFDFMNF KKVSYTFSII LSLISFIWIG MYKFNFGIDF
60 70 80 90 100
AGGIVIEVRL DQTPDLPKMR QVLGELGIGE VVLQNFGSER DLSIRFGSSS
110 120 130 140 150
EDNLMKNIEL IKSTLQNNFP YNFEYRKVDF VGPQVGRQLI EAGTMAMLFS
160 170 180 190 200
FAAIMIYIWV RFEWYFGLGI LIALVHDVIL ALGFMSITKL DFNLSTIAAV
210 220 230 240 250
LTIIGYSVND SVVIYDRIRE NLRKYHKKGI TEIINLSINE TLSRTILTVV
260 270 280 290 300
TTLLANLALV LFGGEAIRSF SVLVFFGIIA GTYSSIFISA PILTIFANKK

FEK
Length:303
Mass (Da):34,349
Last modified:May 16, 2006 - v1
Checksum:i5016D954487DA3E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA Translation: ABE05265.1
RefSeqiWP_011477843.1, NC_007940.1

Genome annotation databases

EnsemblBacteriaiABE05265; ABE05265; RBE_1184
KEGGirbe:RBE_1184

Similar proteinsi

Entry informationi

Entry nameiSECF_RICBR
AccessioniPrimary (citable) accession number: Q1RH99
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 16, 2006
Last modified: April 25, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health