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Q1RH99

- SECF_RICBR

UniProt

Q1RH99 - SECF_RICBR

Protein

Protein translocase subunit SecF

Gene

secF

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (16 May 2006)
      Previous versions | rss
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    Functioni

    Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.UniRule annotation

    GO - Molecular functioni

    1. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro

    GO - Biological processi

    1. intracellular protein transmembrane transport Source: UniProtKB-HAMAP
    2. protein targeting Source: UniProtKB-HAMAP
    3. protein transport by the Sec complex Source: UniProtKB-HAMAP

    Keywords - Biological processi

    Protein transport, Translocation, Transport

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-1219-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein translocase subunit SecF
    Gene namesi
    Name:secFUniRule annotation
    Ordered Locus Names:RBE_1184
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. intracellular Source: GOC
    3. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 303303Protein translocase subunit SecFPRO_0000272637Add
    BLAST

    Interactioni

    Subunit structurei

    Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.UniRule annotation

    Protein-protein interaction databases

    STRINGi336407.RBE_1184.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RH99.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei28 – 4821HelicalUniRule annotationAdd
    BLAST
    Transmembranei140 – 16021HelicalUniRule annotationAdd
    BLAST
    Transmembranei164 – 18421HelicalUniRule annotationAdd
    BLAST
    Transmembranei194 – 21421HelicalUniRule annotationAdd
    BLAST
    Transmembranei246 – 26621HelicalUniRule annotationAdd
    BLAST
    Transmembranei272 – 29221HelicalUniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SecD/SecF family. SecF subfamily.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0341.
    HOGENOMiHOG000245916.
    KOiK03074.
    OMAiEEMLIKF.
    OrthoDBiEOG676Z5R.

    Family and domain databases

    HAMAPiMF_01464_B. SecF_B.
    InterProiIPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    IPR000731. SSD.
    [Graphical view]
    PfamiPF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view]
    PRINTSiPR01755. SECFTRNLCASE.
    TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.
    PROSITEiPS50156. SSD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1RH99-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQIYPLRLLP NKIDFDFMNF KKVSYTFSII LSLISFIWIG MYKFNFGIDF    50
    AGGIVIEVRL DQTPDLPKMR QVLGELGIGE VVLQNFGSER DLSIRFGSSS 100
    EDNLMKNIEL IKSTLQNNFP YNFEYRKVDF VGPQVGRQLI EAGTMAMLFS 150
    FAAIMIYIWV RFEWYFGLGI LIALVHDVIL ALGFMSITKL DFNLSTIAAV 200
    LTIIGYSVND SVVIYDRIRE NLRKYHKKGI TEIINLSINE TLSRTILTVV 250
    TTLLANLALV LFGGEAIRSF SVLVFFGIIA GTYSSIFISA PILTIFANKK 300
    FEK 303
    Length:303
    Mass (Da):34,349
    Last modified:May 16, 2006 - v1
    Checksum:i5016D954487DA3E6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05265.1.
    RefSeqiYP_538354.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE05265; ABE05265; RBE_1184.
    GeneIDi3995270.
    KEGGirbe:RBE_1184.
    PATRICi17883973. VBIRicBel102610_1337.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05265.1 .
    RefSeqi YP_538354.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RH99.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_1184.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE05265 ; ABE05265 ; RBE_1184 .
    GeneIDi 3995270.
    KEGGi rbe:RBE_1184.
    PATRICi 17883973. VBIRicBel102610_1337.

    Phylogenomic databases

    eggNOGi COG0341.
    HOGENOMi HOG000245916.
    KOi K03074.
    OMAi EEMLIKF.
    OrthoDBi EOG676Z5R.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-1219-MONOMER.

    Family and domain databases

    HAMAPi MF_01464_B. SecF_B.
    InterProi IPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    IPR000731. SSD.
    [Graphical view ]
    Pfami PF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view ]
    PRINTSi PR01755. SECFTRNLCASE.
    TIGRFAMsi TIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.
    PROSITEi PS50156. SSD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiSECF_RICBR
    AccessioniPrimary (citable) accession number: Q1RH99
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2007
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3