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Q1RH99 (SECF_RICBR) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein translocase subunit SecF
Gene names
Name:secF
Ordered Locus Names:RBE_1184
OrganismRickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]
Taxonomic identifier336407 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group

Protein attributes

Sequence length303 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA By similarity. HAMAP-Rule MF_01464

Subunit structure

Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC By similarity.

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01464.

Sequence similarities

Belongs to the SecD/SecF family. SecF subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 303303Protein translocase subunit SecF HAMAP-Rule MF_01464
PRO_0000272637

Regions

Transmembrane28 – 4821Helical; Potential
Transmembrane140 – 16021Helical; Potential
Transmembrane164 – 18421Helical; Potential
Transmembrane194 – 21421Helical; Potential
Transmembrane246 – 26621Helical; Potential
Transmembrane272 – 29221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q1RH99 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 5016D954487DA3E6

FASTA30334,349
        10         20         30         40         50         60 
MQIYPLRLLP NKIDFDFMNF KKVSYTFSII LSLISFIWIG MYKFNFGIDF AGGIVIEVRL 

        70         80         90        100        110        120 
DQTPDLPKMR QVLGELGIGE VVLQNFGSER DLSIRFGSSS EDNLMKNIEL IKSTLQNNFP 

       130        140        150        160        170        180 
YNFEYRKVDF VGPQVGRQLI EAGTMAMLFS FAAIMIYIWV RFEWYFGLGI LIALVHDVIL 

       190        200        210        220        230        240 
ALGFMSITKL DFNLSTIAAV LTIIGYSVND SVVIYDRIRE NLRKYHKKGI TEIINLSINE 

       250        260        270        280        290        300 
TLSRTILTVV TTLLANLALV LFGGEAIRSF SVLVFFGIIA GTYSSIFISA PILTIFANKK 


FEK 

« Hide

References

[1]"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RML369-C.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000087 Genomic DNA. Translation: ABE05265.1.
RefSeqYP_538354.1. NC_007940.1.

3D structure databases

ProteinModelPortalQ1RH99.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING336407.RBE_1184.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE05265; ABE05265; RBE_1184.
GeneID3995270.
KEGGrbe:RBE_1184.
PATRIC17883973. VBIRicBel102610_1337.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0341.
HOGENOMHOG000245916.
KOK03074.
OMAMWLGVKR.
OrthoDBEOG676Z5R.
ProtClustDBPRK13022.

Enzyme and pathway databases

BioCycRBEL336407:GJCY-1219-MONOMER.

Family and domain databases

HAMAPMF_01464_B. SecF_B.
InterProIPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
IPR005665. SecF_bac.
IPR000731. SSD.
[Graphical view]
PfamPF07549. Sec_GG. 1 hit.
PF02355. SecD_SecF. 1 hit.
[Graphical view]
PRINTSPR01755. SECFTRNLCASE.
TIGRFAMsTIGR00916. 2A0604s01. 1 hit.
TIGR00966. 3a0501s07. 1 hit.
PROSITEPS50156. SSD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSECF_RICBR
AccessionPrimary (citable) accession number: Q1RH99
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 16, 2006
Last modified: February 19, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia bellii strain RML369-C

Rickettsia bellii (strain RML369-C): entries and gene names