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Q1RH88

- SODF_RICBR

UniProt

Q1RH88 - SODF_RICBR

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Protein
Superoxide dismutase [Mn/Fe]
Gene
sodB, RBE_1195
Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Cofactori

Binds 1 manganese or iron ion per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi38 – 381Manganese or iron By similarity
Metal bindingi90 – 901Manganese or iron By similarity
Metal bindingi172 – 1721Manganese or iron By similarity
Metal bindingi176 – 1761Manganese or iron By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Iron, Manganese, Metal-binding

    Enzyme and pathway databases

    BioCyciRBEL336407:GJCY-1230-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Mn/Fe] (EC:1.15.1.1)
    Gene namesi
    Name:sodB
    Ordered Locus Names:RBE_1195
    OrganismiRickettsia bellii (strain RML369-C)
    Taxonomic identifieri336407 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
    ProteomesiUP000001951: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 209209Superoxide dismutase [Mn/Fe]
    PRO_0000286501Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi336407.RBE_1195.

    Structurei

    3D structure databases

    ProteinModelPortaliQ1RH88.
    SMRiQ1RH88. Positions 14-208.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiWTWLVKG.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q1RH88-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTYCDKSNQT SYPFVLPNLP YEKESFKPHF TAETFEYHHG KHHNAYVQNL    50
    NNLLKDKEEL QKKNLEEIID WSSQNQNIAI FNNAAQVWNH TFFWHSIKPN 100
    GGGKPSGKIL KQINEDFGSF EEFCEQFKAE ATGQFGSGWA WLVYHNNRLQ 150
    IVKTANAGTP IANGMQPLLA CDVWEHAYYI DYRNKRPDYV DIFIKHMINW 200
    EFVENNLTK 209
    Length:209
    Mass (Da):24,496
    Last modified:May 16, 2006 - v1
    Checksum:i95241EDC5FE971FD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05276.1.
    RefSeqiYP_538365.1. NC_007940.1.

    Genome annotation databases

    EnsemblBacteriaiABE05276; ABE05276; RBE_1195.
    GeneIDi3995281.
    KEGGirbe:RBE_1195.
    PATRICi17883995. VBIRicBel102610_1348.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000087 Genomic DNA. Translation: ABE05276.1 .
    RefSeqi YP_538365.1. NC_007940.1.

    3D structure databases

    ProteinModelPortali Q1RH88.
    SMRi Q1RH88. Positions 14-208.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 336407.RBE_1195.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE05276 ; ABE05276 ; RBE_1195 .
    GeneIDi 3995281.
    KEGGi rbe:RBE_1195.
    PATRICi 17883995. VBIRicBel102610_1348.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi WTWLVKG.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci RBEL336407:GJCY-1230-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
      Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
      PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: RML369-C.

    Entry informationi

    Entry nameiSODF_RICBR
    AccessioniPrimary (citable) accession number: Q1RH88
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 15, 2007
    Last sequence update: May 16, 2006
    Last modified: July 9, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia bellii strain RML369-C
      Rickettsia bellii (strain RML369-C): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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