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Protein

tRNA threonylcarbamoyladenosine biosynthesis protein TsaE

Gene

tsaE

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaD and TsaB. TsaE seems to play an indirect role in the t6A biosynthesis pathway, possibly in regulating the core enzymatic function of TsaD (By similarity).By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei13 – 131ATPBy similarity
Metal bindingi44 – 441MagnesiumBy similarity
Metal bindingi110 – 1101MagnesiumBy similarity
Binding sitei133 – 1331ATP; via carbonyl oxygenBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi40 – 456ATPBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

ATP-binding, Magnesium, Metal-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1324-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaE
Gene namesi
Name:tsaE
Ordered Locus Names:RBE_1286
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 144144tRNA threonylcarbamoyladenosine biosynthesis protein TsaEPRO_0000281041Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ1RGZ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TsaE family.Curated

Phylogenomic databases

eggNOGiCOG0802.
HOGENOMiHOG000052239.
KOiK06925.
OMAiFALMIDY.
OrthoDBiEOG6GBMHT.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR003442. T6A_TsaE.
[Graphical view]
PfamiPF02367. UPF0079. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00150. T6A_YjeE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RGZ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQMLNSQTIL NSEEETKNFA KAFAATLKPN NIVLLNGDLG VGKTFFCREI
60 70 80 90 100
IKYFCGENTS IISPTFNLLQ TYKTPHFTIY HCDLYRLKSP EEIYELGLEE
110 120 130 140
ALSGNLTLIE WSEIIKHLLP TPLIEVNLKL LDDDKRLCNI TNEY
Length:144
Mass (Da):16,548
Last modified:May 16, 2006 - v1
Checksum:i7B1FBFFA3BC58546
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05367.1.

Genome annotation databases

EnsemblBacteriaiABE05367; ABE05367; RBE_1286.
KEGGirbe:RBE_1286.
PATRICi17884204. VBIRicBel102610_1450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05367.1.

3D structure databases

ProteinModelPortaliQ1RGZ7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE05367; ABE05367; RBE_1286.
KEGGirbe:RBE_1286.
PATRICi17884204. VBIRicBel102610_1450.

Phylogenomic databases

eggNOGiCOG0802.
HOGENOMiHOG000052239.
KOiK06925.
OMAiFALMIDY.
OrthoDBiEOG6GBMHT.

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1324-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR003442. T6A_TsaE.
[Graphical view]
PfamiPF02367. UPF0079. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00150. T6A_YjeE. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiTSAE_RICBR
AccessioniPrimary (citable) accession number: Q1RGZ7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 20, 2007
Last sequence update: May 16, 2006
Last modified: July 22, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.