Q1RGX7 (Q1RGX7_RICBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endonuclease III EMBL ABE05387.1
EC=4.2.99.18 EMBL ABE05387.1

Gene names

Name:	nth EMBL ABE05387.1
Ordered Locus Names:	RBE_1306

Organism

Rickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP] EMBL ABE05387.1

Taxonomic identifier

336407 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › belli group › Rickettsia bellii

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Endonuclease EMBL ABE05387.1 Hydrolase Lyase EMBL ABE05387.1 Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: EC endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1RGX7 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 03575C9BCD220E9D	FASTA	315	35,162
	10 20 30 40 50 60 MSQPPTNSPL IYNCGNVGQS LKTFKDSRNS GSDNTSISRN STPSLVKIIT TLPENPHIGA 70 80 90 100 110 120 SLVPFMNNTT LLFFISFSIN LKLLFSNIKN LICLILFVTL YTMQAEIVNK IFEVFSKNNE 130 140 150 160 170 180 NPKTELVYKN NFTLLVAVIL SAQATDVSVN LATKSLFEIY DTPEKILGLG EEGLKKYIKS 190 200 210 220 230 240 IGLFNSKAKN VIALCQILIS NYDSKVPNNF EELVKLPGVG RKTANVVLNC LFGLPTMAVD 250 260 270 280 290 300 THVFRVAKRI GLAKGNTPEA VEKELLQIID GKWLSHAHHW LILHGRYICK ARKPDCEICP 310 IKEYCEYYKS ATKII

References

[1]

"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens." Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D. PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RML369-C.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000087 Genomic DNA. Translation: ABE05387.1.
RefSeq	YP_538476.1. NC_007940.1.
3D structure databases
ProteinModelPortal	Q1RGX7.
SMR	Q1RGX7. Positions 106-311.
ModBase	Search...
Protein-protein interaction databases
STRING	336407.RBE_1306.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE05387; ABE05387; RBE_1306.
GeneID	3995523.
KEGG	rbe:RBE_1306.
PATRIC	17884246. VBIRicBel102610_1471.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0177.
HOGENOM	HOG000252206.
KO	K10773.
OMA	CIIADIC.
ProtClustDB	CLSK871058.
Enzyme and pathway databases
BioCyc	RBEL336407:GJCY-1344-MONOMER.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR004036. Endonuclease-III_CS2. IPR005759. Endonuclease-III_Nth. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR000445. HhH_motif. IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF10576. EndIII_4Fe-2S. 1 hit. PF00633. HHH. 1 hit. PF00730. HhH-GPD. 1 hit. [Graphical view]
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. SM00278. HhH1. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
TIGRFAMs	TIGR01083. nth. 1 hit.
PROSITE	PS01155. ENDONUCLEASE_III_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1RGX7_RICBR

Accession

Primary (citable) accession number: Q1RGX7

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)