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Protein

Probable chromosome-partitioning protein ParB

Gene

parB

Organism
Rickettsia bellii (strain RML369-C)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Chromosome partition

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1387-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chromosome-partitioning protein ParB
Gene namesi
Name:parB
Ordered Locus Names:RBE_1349
OrganismiRickettsia bellii (strain RML369-C)
Taxonomic identifieri336407 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiabelli group
ProteomesiUP000001951 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 287287Probable chromosome-partitioning protein ParBPRO_0000291836Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi336407.RBE_1349.

Structurei

3D structure databases

ProteinModelPortaliQ1RGT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ParB family.Curated

Phylogenomic databases

eggNOGiCOG1475.
HOGENOMiHOG000088074.
KOiK03497.
OrthoDBiEOG6Z3KMS.

Family and domain databases

InterProiIPR004437. ParB/RepB/Spo0J.
IPR003115. ParB/Sulfiredoxin_dom.
[Graphical view]
PfamiPF02195. ParBc. 1 hit.
[Graphical view]
SMARTiSM00470. ParB. 1 hit.
[Graphical view]
SUPFAMiSSF110849. SSF110849. 1 hit.
TIGRFAMsiTIGR00180. parB_part. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1RGT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNKGLGRGL SSLLGEEVIS TEKESLEIVQ IINIDRIKPN ENQPRKHFEY
60 70 80 90 100
DKIKELSDSI LNNGLLQPII IDNSFQIIAG ERRWRACKLA KISEIPVIIK
110 120 130 140 150
NLDAKESMEI ALIENIQRSD LTVMEEARGF KYLVENFNYT AEKLAERLGK
160 170 180 190 200
SRSHIANLLR LNNLPQSIQN KLDENTLSMG HARCLINHEH AEIIANYVID
210 220 230 240 250
NDLNVRQTEE LVRQWSQNEY TKYPDNNRIG KQLFKEKTED NDLQSLVKIL
260 270 280
SEKFNIKVTI ENYSLGGKLI FHYKDLKELD KILLELS
Length:287
Mass (Da):33,214
Last modified:June 26, 2007 - v2
Checksum:i48F649703B7DCF00
GO

Sequence cautioni

The sequence ABE05430.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05430.1. Different initiation.
RefSeqiWP_011477999.1. NC_007940.1.
YP_538519.1. NC_007940.1.

Genome annotation databases

EnsemblBacteriaiABE05430; ABE05430; RBE_1349.
KEGGirbe:RBE_1349.
PATRICi17884348. VBIRicBel102610_1522.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000087 Genomic DNA. Translation: ABE05430.1. Different initiation.
RefSeqiWP_011477999.1. NC_007940.1.
YP_538519.1. NC_007940.1.

3D structure databases

ProteinModelPortaliQ1RGT4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi336407.RBE_1349.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE05430; ABE05430; RBE_1349.
KEGGirbe:RBE_1349.
PATRICi17884348. VBIRicBel102610_1522.

Phylogenomic databases

eggNOGiCOG1475.
HOGENOMiHOG000088074.
KOiK03497.
OrthoDBiEOG6Z3KMS.

Enzyme and pathway databases

BioCyciRBEL336407:GJCY-1387-MONOMER.

Family and domain databases

InterProiIPR004437. ParB/RepB/Spo0J.
IPR003115. ParB/Sulfiredoxin_dom.
[Graphical view]
PfamiPF02195. ParBc. 1 hit.
[Graphical view]
SMARTiSM00470. ParB. 1 hit.
[Graphical view]
SUPFAMiSSF110849. SSF110849. 1 hit.
TIGRFAMsiTIGR00180. parB_part. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens."
    Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D.
    PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RML369-C.

Entry informationi

Entry nameiPARB_RICBR
AccessioniPrimary (citable) accession number: Q1RGT4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: June 26, 2007
Last modified: May 27, 2015
This is version 46 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia bellii strain RML369-C
    Rickettsia bellii (strain RML369-C): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.