Q1RGK7 (Y1426_RICBR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized deaminase RBE_1426
EC=3.5.4.-

Gene names

Ordered Locus Names:

RBE_1426

Organism

Rickettsia bellii (strain RML369-C) [Complete proteome] [HAMAP]

Taxonomic identifier

336407 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › belli group › Rickettsia bellii

Protein attributes

Sequence length	145 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Zinc By similarity.
Sequence similarities	Belongs to the cytidine and deoxycytidylate deaminase family.
Sequence caution	The sequence ABE05507.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Ligand	Metal-binding Zinc
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 145	145	Uncharacterized deaminase RBE_1426		PRO_0000293135
Sites
	Active site	50	1	Proton donor By similarity
	Metal binding	48	1	Zinc; catalytic By similarity
	Metal binding	78	1	Zinc; catalytic By similarity
	Metal binding	81	1	Zinc; catalytic By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q1RGK7 [UniParc]. Last modified July 10, 2007. Version 2. Checksum: CE6A27A9CE98A90D	FASTA	145	16,358
	10 20 30 40 50 60 MREALKQAEI AFSKNEVPVG AVIVDRENQK IISKSYNNTE EKNNALYHAE IIAINEACRI 70 80 90 100 110 120 ISSKNLSDYD IYVTLEPCAM CAAAIAHSRL KRLFYGASDS KHGAVESNLR YFNSKACFHR 130 140 PEIYSGIFAE DSALLMKGFF KKIRD

References

[1]

"Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens." Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C., Fournier P.-E., Claverie J.-M., Raoult D. PLoS Genet. 2:733-744(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RML369-C.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000087 Genomic DNA. Translation: ABE05507.1. Different initiation.
RefSeq	YP_538596.1. NC_007940.1.
3D structure databases
ProteinModelPortal	Q1RGK7.
ModBase	Search...
Protein-protein interaction databases
STRING	336407.RBE_1426.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE05507; ABE05507; RBE_1426.
GeneID	3995858.
KEGG	rbe:RBE_1426.
PATRIC	17884528. VBIRicBel102610_1609.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0590.
HOGENOM	HOG000085050.
KO	K01485.
ProtClustDB	CLSK871102.
Enzyme and pathway databases
BioCyc	RBEL336407:GJCY-1467-MONOMER.
Family and domain databases
InterPro	IPR016192. APOBEC/CMP_deaminase_Zn-bd. IPR002125. CMP_dCMP_Zn-bd. IPR016193. Cytidine_deaminase-like. [Graphical view]
Pfam	PF00383. dCMP_cyt_deam_1. 1 hit. [Graphical view]
SUPFAM	SSF53927. Cytidine_deaminase-like. 1 hit.
PROSITE	PS00903. CYT_DCMP_DEAMINASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y1426_RICBR

Accession

Primary (citable) accession number: Q1RGK7

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	May 1, 2013
This is version 44 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program