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Q1REU6 (Q1REU6_ECOUT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.8.3.10 EMBL ABE06118.1
Gene names
Name:citF EMBL ABE06118.1
Ordered Locus Names:UTI89_C0618
OrganismEscherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE06118.1
Taxonomic identifier364106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length510 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q1REU6 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: FAF38151DC8CAB77

FASTA51055,161
        10         20         30         40         50         60 
MTQKIEQSQR QERVAAWNRR AECDLAAFQN SPKQTYQAEK ARDRKLCANL EEAIRRSGLQ 

        70         80         90        100        110        120 
DGMTVSFHHA FRGGDLTVNM VMDVIAKMGF KNLTLASSSL SDCHAPLVEH IRQGVVTRIY 

       130        140        150        160        170        180 
TSGLRGPLAE EISRGLLAEP VQIHSHGGRV HLVQSGELNI DVAFLGVPSC DEFGNANGYS 

       190        200        210        220        230        240 
GKACCGSLGY AMVDADNAKQ VVMLTEELLP YPHNPASIEQ DQVDLIVKVD RVGDAAKIGA 

       250        260        270        280        290        300 
GATRMTTNPR ELLIARSAAD VIVNSGYFKE GFSMQTGTGG ASLAVTRFLE DKMRSRDIRA 

       310        320        330        340        350        360 
DFALGGITAT MVDLHEKGLI RKLLDVQSFD SHAAQSLARN PNHIEISANQ YANWGSKGAA 

       370        380        390        400        410        420 
VDRLDVVVLS ALEIDTQFNV NVLTGSDGVL RGASGGHCDT AIASALSIIV APLVRGRIPT 

       430        440        450        460        470        480 
LVDNVLTCIT PGSSVDILVT DHGIAVNPAR PELAERLQEA GIKVVSIEWL RERARLLTGE 

       490        500        510 
PQPIEFTDRV VAVVRYRDGS VIDVVHQVKE 

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References

[1]"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000243 Genomic DNA. Translation: ABE06118.1.
RefSeqYP_539649.1. NC_007946.1.

3D structure databases

ProteinModelPortalQ1REU6.
SMRQ1REU6. Positions 30-509.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1REU6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000067368; EBESCP00000064846; EBESCG00000066415.
GeneID3990942.
GenomeReviewsGene locus UTI89_C0618 in contig CP000243_GR.
KEGGeci:UTI89_C0618.
PATRIC18450899. VBIEscCol42261_0720.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3051.
GeneTreeEBGT00050000009608.
HOGENOMHBG297040.
OMAKGSVINQ.
ProtClustDBCLSK874113.

Family and domain databases

InterProIPR006472. Citrate_lyase_asu.
[Graphical view]
KOK01643.
PfamPF04223. CitF. 1 hit.
[Graphical view]
PIRSFPIRSF009451. Citrt_lyas_alpha. 1 hit.
TIGRFAMsTIGR01584. CitF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1REU6_ECOUT
AccessionPrimary (citable) accession number: Q1REU6
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)