Q1REF8 (Q1REF8_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative lipoprotein YbhC EMBL ABE06256.1
EC=3.1.1.11 EMBL ABE06256.1

Gene names

Name:	ybhC EMBL ABE06256.1
Ordered Locus Names:	UTI89_C0770

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE06256.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	427 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABE06256.1
PTM	Lipoprotein EMBL ABE06256.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall modification Inferred from electronic annotation. Source: InterPro
Cellular component	cell wall Inferred from electronic annotation. Source: InterPro
Molecular function	pectinesterase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1REF8 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 3DB4A1BFA4358B1D	FASTA	427	46,008
	10 20 30 40 50 60 MNTFSVSRLA LALAFGVTLT ACSSTPPDQR PSDQTAPGTS SRPILSAKEA QNFDAQHYFA 70 80 90 100 110 120 SLTPGAAAWN PSPITLPAQP DFVVGPAGTQ GVTHTTIQAA VDAAIIKRTN KRQYIAVMPG 130 140 150 160 170 180 EYQGTVYVPA APGGITLYGT GEKPIDVKIG LSLDGGMSPA DWRHDVNPRG KYMPGKPAWY 190 200 210 220 230 240 MYDSCQSKRS DSIGVLCSAV FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 250 260 270 280 290 300 QINNVNILGR QNTFFVTNSG VQNRLETNRQ PRTLVTNSYI EGDVDIVSGR GAVVFDNTEF 310 320 330 340 350 360 RVVNSRTQQE AYVFAPATLS NIYYGFLAVN SRFNASGDGV AQLGRSLDVD ANTNGQVVIR 370 380 390 400 410 420 DSAINEGFNT AKPWADAVIS NRPFAGNTGS VDDNDEVQRN LNDTNYNRMW EYNNRGVGSK VVAEAKK

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE06256.1.
RefSeq	YP_539787.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1REF8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1REF8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000068979; EBESCP00000066457; EBESCG00000068026.
GeneID	3992888.
GenomeReviews	Gene locus UTI89_C0770 in contig CP000243_GR.
KEGG	eci:UTI89_C0770.
PATRIC	18451201. VBIEscCol42261_0857.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4677.
GeneTree	EBGT00050000010934.
HOGENOM	HBG416454.
OMA	FLATNSR.
ProtClustDB	PRK10531.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. IPR018040. Pectinesterase_AS. IPR000070. Pectinesterase_cat. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01051.
Pfam	PF01095. Pectinesterase. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00503. PECTINESTERASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1REF8_ECOUT

Accession

Primary (citable) accession number: Q1REF8

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)