Q1RBS9 (Q1RBS9_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase beta EMBL ABE07185.1
EC=4.1.1.15 EMBL ABE07185.1

Gene names

Name:	gadB EMBL ABE07185.1
Ordered Locus Names:	UTI89_C1707 EMBL ABE07185.1

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE07185.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	489 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ABE07185.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1RBS9 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: D885B97966EBCAF7	FASTA	489	55,440
	10 20 30 40 50 60 MHLLTLSINP TFLMRSNHFK EFKMDKKQVT DLRSELLDSR FGAKSISTIA ESKRFPLHEM 70 80 90 100 110 120 RDDVAFQIIN DELYLDGNAR QNLATFCQTW DDDNVHKLMD LSINKNWIDK EEYPQSAAID 130 140 150 160 170 180 LRCVNMVADL WHAPAPKNGQ AVGTNTIGSS EACMLGGMAM KWRWRKRMEA AGKPTNKPNL 190 200 210 220 230 240 VCGPVQICWH KFARYWDVEL REIPMRPGQL FMDPKRMIEA CDENTIGVVP TFGVTYTGNY 250 260 270 280 290 300 EFPQPLHDAL DKFQADTGID IDMHIDAASG GFLAPFVAPD IVWDFRLPRV KSISASGHKF 310 320 330 340 350 360 GLAPLGCGWV IWRDEEALPQ ELVFNVDYLG GQIGTFAINF SRPAGQVIAQ YYEFLRLGRE 370 380 390 400 410 420 GYTKVQNASY QVAAYLADEI AKLGPYEFIC TGRPDEGIPA VCFKLKDGED PGYTLYDLSE 430 440 450 460 470 480 RLRLRGWQVP AFTLGGEATD IVVMRIMCRR GFEMDFAELL LEDYKASLKY LSDHPKLQGI AQQNSFKHT

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UTI89 / UPEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE07185.1.
RefSeq	YP_540716.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1RBS9.
SMR	Q1RBS9. Positions 27-489.
ModBase	Search...
Protein-protein interaction databases
STRING	364106.UTI89_C1707.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE07185; ABE07185; UTI89_C1707.
GeneID	3991446.
KEGG	eci:UTI89_C1707.
PATRIC	18453004. VBIEscCol42261_1751.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	PMDKEHM.
ProtClustDB	CLSK880040.
Enzyme and pathway databases
BioCyc	ECOL364106:GHPQ-1772-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR021115. Pyridoxal-P_BS. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1RBS9_ECOUT

Accession

Primary (citable) accession number: Q1RBS9

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)