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Q1RBS9 (Q1RBS9_ECOUT) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ABE07185.1
Gene names
Name:gadB EMBL ABE07185.1
Ordered Locus Names:UTI89_C1707 EMBL ABE07185.1
OrganismEscherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE07185.1
Taxonomic identifier364106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q1RBS9 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: D885B97966EBCAF7

FASTA48955,440
        10         20         30         40         50         60 
MHLLTLSINP TFLMRSNHFK EFKMDKKQVT DLRSELLDSR FGAKSISTIA ESKRFPLHEM 

        70         80         90        100        110        120 
RDDVAFQIIN DELYLDGNAR QNLATFCQTW DDDNVHKLMD LSINKNWIDK EEYPQSAAID 

       130        140        150        160        170        180 
LRCVNMVADL WHAPAPKNGQ AVGTNTIGSS EACMLGGMAM KWRWRKRMEA AGKPTNKPNL 

       190        200        210        220        230        240 
VCGPVQICWH KFARYWDVEL REIPMRPGQL FMDPKRMIEA CDENTIGVVP TFGVTYTGNY 

       250        260        270        280        290        300 
EFPQPLHDAL DKFQADTGID IDMHIDAASG GFLAPFVAPD IVWDFRLPRV KSISASGHKF 

       310        320        330        340        350        360 
GLAPLGCGWV IWRDEEALPQ ELVFNVDYLG GQIGTFAINF SRPAGQVIAQ YYEFLRLGRE 

       370        380        390        400        410        420 
GYTKVQNASY QVAAYLADEI AKLGPYEFIC TGRPDEGIPA VCFKLKDGED PGYTLYDLSE 

       430        440        450        460        470        480 
RLRLRGWQVP AFTLGGEATD IVVMRIMCRR GFEMDFAELL LEDYKASLKY LSDHPKLQGI 


AQQNSFKHT 

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References

[1]"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UTI89 / UPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000243 Genomic DNA. Translation: ABE07185.1.
RefSeqYP_540716.1. NC_007946.1.

3D structure databases

ProteinModelPortalQ1RBS9.
SMRQ1RBS9. Positions 27-489.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING364106.UTI89_C1707.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE07185; ABE07185; UTI89_C1707.
GeneID3991446.
KEGGeci:UTI89_C1707.
PATRIC18453004. VBIEscCol42261_1751.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK880040.

Enzyme and pathway databases

BioCycECOL364106:GHPQ-1694-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1RBS9_ECOUT
AccessionPrimary (citable) accession number: Q1RBS9
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: February 19, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)