Q1RBK6 (Q1RBK6_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative dethiobiotin synthetase EMBL ABE07258.1
EC=6.3.3.3 EMBL ABE07258.1

Gene names

Name:	ynfK EMBL ABE07258.1
Ordered Locus Names:	UTI89_C1780

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE07258.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Ligase EMBL ABE07258.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	biotin biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW dethiobiotin synthase activity Inferred from electronic annotation. Source: EC magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1RBK6 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 95C46CA35ABEA347	FASTA	235	25,440
	10 20 30 40 50 60 MELVMLKRFF ITGTDTSVGK TVVSRALLQA LASQGKTVAG YKPVAKGSKE TPEGLRNKDA 70 80 90 100 110 120 LVLQSVSTIE LPYEAVNPIA LSEEESSVAH SCPINYTLIS NGLANLTDKV DHVVVEGTGG 130 140 150 160 170 180 WRSLMNDLRP LSEWVVQEQL PVLMVVGIQE GCINHALLTA QAIANDGLPL IGWVANRINP 190 200 210 220 230 GLAHYAEIID VLGKKLPAPL IGELPYLPRA EQRELGQYIR LAMLRSVLAV DRVTV

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE07258.1.
RefSeq	YP_540789.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1RBK6.
SMR	Q1RBK6. Positions 7-224.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1RBK6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000065986; EBESCP00000063464; EBESCG00000065033.
GeneID	3993946.
GenomeReviews	Gene locus UTI89_C1780 in contig CP000243_GR.
KEGG	eci:UTI89_C1780.
PATRIC	18453154. VBIEscCol42261_1826.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0132.
GeneTree	EBGT00050000010427.
HOGENOM	HBG650065.
OMA	INPGLSH.
ProtClustDB	PRK12374.
Family and domain databases
HAMAP	MF_00336. BioD. [Tree]
InterPro	IPR002586. CbiA_P_synth. IPR004472. DTB_synth_BioD. [Graphical view]
KO	K01935.
Pfam	PF01656. CbiA. 1 hit. [Graphical view]
PIRSF	PIRSF006755. DTB_synth. 1 hit.
TIGRFAMs	TIGR00347. BioD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1RBK6_ECOUT

Accession

Primary (citable) accession number: Q1RBK6

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)