Q1RBE9 (Q1RBE9_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393

Gene names

Name:	sodC EMBL ABE07315.1
Ordered Locus Names:	UTI89_C1837 EMBL ABE07315.1

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE07315.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	190 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393
Cofactor	Binds 1 copper ion per subunit By similarity. RuleBase RU000393 Binds 1 zinc ion per subunit By similarity. RuleBase RU000393
Sequence similarities	Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Ontologies

Keywords
Ligand	Copper RuleBase RU000393 Metal-binding RuleBase RU000393 Zinc RuleBase RU000393
Molecular function	Oxidoreductase RuleBase RU000393 EMBL ABE07315.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1RBE9 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 6CD83A79AE1A9680	FASTA	190	19,643
	10 20 30 40 50 60 MCHWFTLIQE CTMNGGPMKR FSLAILALVV ATGAQAASEK VEMNLVTSQG VGQLIGSVTI 70 80 90 100 110 120 TETDKGLEFS PDLKALPPGE HGFHIHAKGS CQPATKDGKA SAAESAGGHL DPQNTGKHEG 130 140 150 160 170 180 PEGAGHLGDL PALVVNNDGK ATDAVIAPRL KSLDEVKDKA LMVHVGGDNM SDQPKPLGGG 190 GERYACGVIK

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UTI89 / UPEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE07315.1.
RefSeq	YP_540846.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1RBE9.
SMR	Q1RBE9. Positions 37-190.
ModBase	Search...
Protein-protein interaction databases
STRING	364106.UTI89_C1837.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE07315; ABE07315; UTI89_C1837.
GeneID	3992774.
KEGG	eci:UTI89_C1837.
PATRIC	18453260. VBIEscCol42261_1879.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2032.
HOGENOM	HOG000263449.
KO	K04565.
OMA	NTNSHQG.
ProtClustDB	PRK10290.
Enzyme and pathway databases
BioCyc	ECOL364106:GHPQ-1901-MONOMER.
Family and domain databases
Gene3D	2.60.40.200. 1 hit.
InterPro	IPR024134. SOD_Cu/Zn_/chaperones. IPR018152. SOD_Cu/Zn_BS. IPR001424. SOD_Cu_Zn_dom. [Graphical view]
PANTHER	PTHR10003. PTHR10003. 1 hit.
Pfam	PF00080. Sod_Cu. 1 hit. [Graphical view]
SUPFAM	SSF49329. SOD_Cu_Zn. 1 hit.
PROSITE	PS00332. SOD_CU_ZN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1RBE9_ECOUT

Accession

Primary (citable) accession number: Q1RBE9

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	May 1, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)