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Q1RBE9

- Q1RBE9_ECOUT

UniProt

Q1RBE9 - Q1RBE9_ECOUT

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Protein

Superoxide dismutase [Cu-Zn]

Gene
sodC, UTI89_C1837
Organism
Escherichia coli (strain UTI89 / UPEC)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciECOL364106:GHPQ-1823-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
Ordered Locus Names:UTI89_C1837Imported
OrganismiEscherichia coli (strain UTI89 / UPEC)Imported
Taxonomic identifieri364106 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001952: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi364106.UTI89_C1837.

Structurei

3D structure databases

ProteinModelPortaliQ1RBE9.
SMRiQ1RBE9. Positions 37-190.

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263449.
KOiK04565.
OMAiDHPKPLG.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1RBE9-1 [UniParc]FASTAAdd to Basket

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MCHWFTLIQE CTMNGGPMKR FSLAILALVV ATGAQAASEK VEMNLVTSQG    50
VGQLIGSVTI TETDKGLEFS PDLKALPPGE HGFHIHAKGS CQPATKDGKA 100
SAAESAGGHL DPQNTGKHEG PEGAGHLGDL PALVVNNDGK ATDAVIAPRL 150
KSLDEVKDKA LMVHVGGDNM SDQPKPLGGG GERYACGVIK 190
Length:190
Mass (Da):19,643
Last modified:May 16, 2006 - v1
Checksum:i6CD83A79AE1A9680
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000243 Genomic DNA. Translation: ABE07315.1.
RefSeqiYP_540846.1. NC_007946.1.

Genome annotation databases

EnsemblBacteriaiABE07315; ABE07315; UTI89_C1837.
GeneIDi3992774.
KEGGieci:UTI89_C1837.
PATRICi18453260. VBIEscCol42261_1879.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000243 Genomic DNA. Translation: ABE07315.1 .
RefSeqi YP_540846.1. NC_007946.1.

3D structure databases

ProteinModelPortali Q1RBE9.
SMRi Q1RBE9. Positions 37-190.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 364106.UTI89_C1837.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE07315 ; ABE07315 ; UTI89_C1837 .
GeneIDi 3992774.
KEGGi eci:UTI89_C1837.
PATRICi 18453260. VBIEscCol42261_1879.

Phylogenomic databases

eggNOGi COG2032.
HOGENOMi HOG000263449.
KOi K04565.
OMAi DHPKPLG.
OrthoDBi EOG6K13RS.

Enzyme and pathway databases

BioCyci ECOL364106:GHPQ-1823-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
    Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
    Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UTI89 / UPEC.

Entry informationi

Entry nameiQ1RBE9_ECOUT
AccessioniPrimary (citable) accession number: Q1RBE9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: July 9, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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