Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q1RB18 (Q1RB18_ECOUT) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=1.1.1.14 EMBL ABE07446.1
Gene names
Name:ydjJ EMBL ABE07446.1
Ordered Locus Names:UTI89_C1970
OrganismEscherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE07446.1
Taxonomic identifier364106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length347 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1RB18 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: F8E20C203F62CA3A

FASTA34737,731
        10         20         30         40         50         60 
MKNSKAILQV PGTMKIISAE IPVPKEDEVL IKVEYVGICG SDVHGFESGP FIPPKDPNQE 

        70         80         90        100        110        120 
IGLGHECAGT VVAVGSRVRK FKPGDRVNIE PGVPCGHCRY CLEGKYNICP DVDFMATQPN 

       130        140        150        160        170        180 
YRGALTHYLC HPESFTYKLP DNMDTMEGAL VEPAAVGMHA AMLADVKPGK KIIILGAGCI 

       190        200        210        220        230        240 
GLMTLQACKC LGATEIAVVD VLEKRLTMAE QLGATVVING AKEDTIARCQ QFTEDMGADI 

       250        260        270        280        290        300 
VFETAGSAVT VKQAPYLVMR GGKIMIVGTV PGDSAINFLK INREVTIQTV FRYANRYPVT 

       310        320        330        340 
IEAISSGRFD VKSMVTHIYD YRDVQQAFEE SVNNKRDIIK GVIKISD 

« Hide

References

[1]"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000243 Genomic DNA. Translation: ABE07446.1.
RefSeqYP_540977.1. NC_007946.1.

3D structure databases

ProteinModelPortalQ1RB18.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1RB18.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000068496; EBESCP00000065974; EBESCG00000067543.
GeneID3990667.
GenomeReviewsGene locus UTI89_C1970 in contig CP000243_GR.
KEGGeci:UTI89_C1970.
PATRIC18453528. VBIEscCol42261_2011.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1063.
GeneTreeEBGT00050000008795.
HOGENOMHBG753318.
OMAKCLGATD.
ProtClustDBCLSK880192.

Family and domain databases

InterProIPR013149. ADH_C.
IPR013154. ADH_GroES-like.
IPR002085. ADH_SF_Zn-type.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00008.
PANTHERPTHR11695. ADH_Sf_Zn. 1 hit.
PfamPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SUPFAMSSF50129. GroES_like. 1 hit.
PROSITEPS00059. ADH_ZINC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1RB18_ECOUT
AccessionPrimary (citable) accession number: Q1RB18
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)