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Q1R6L2 (Q1R6L2_ECOUT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.1.60 EMBL ABE09002.1
Gene names
Name:yhaE EMBL ABE09002.1
Ordered Locus Names:UTI89_C3556
OrganismEscherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE09002.1
Taxonomic identifier364106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length299 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q1R6L2 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 08E65F7849754566

FASTA29931,049
        10         20         30         40         50         60 
MIDMTMKVGF IGLGIMGKPM SKNLLKAGYS LVVADRNPEA IADVIAAGAE TASTAKAIAE 

        70         80         90        100        110        120 
QCDVIITMLP NSPHVKEVAL GENGIIEGAK PGTVLIDMSS IAPLASREIS EALKAKGIDM 

       130        140        150        160        170        180 
LDAPVSGGEP KAIDGTLSVM VGGDKAIFDK YYDLMKAMAG SVVHTGEIGA GNVTKLANQV 

       190        200        210        220        230        240 
IVALNIAAMS EALTLATKAG VNPDLVYQAI RGGLAGSTVL DAKAPMVMDR NFKPGFRIDL 

       250        260        270        280        290 
HIKDLANALD TSHGVGAQLP LTAAVMEMMQ ALRADGLGMA DHSALACYYE KLAKVEVTR 

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References

[1]"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000243 Genomic DNA. Translation: ABE09002.1.
RefSeqYP_542533.2. NC_007946.1.

3D structure databases

ProteinModelPortalQ1R6L2.
SMRQ1R6L2. Positions 6-299.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1R6L2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000066653; EBESCP00000064131; EBESCG00000065700.
GeneID3990327.
GenomeReviewsGene locus UTI89_C3556 in contig CP000243_GR.
KEGGeci:UTI89_C3556.
PATRIC18456612. VBIEscCol42261_3522.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2084.
GeneTreeEBGT00050000009837.
HOGENOMHBG729179.
OMAWSRRRES.
ProtClustDBPRK11559.

Family and domain databases

InterProIPR002204. 3-OH-isobutyrate_DH-rel_CS.
IPR015815. 3hydroxyacid_DH/Rdtase.
IPR008927. 6-PGluconate_DH_C-like.
IPR006115. 6PGDH_NADP-bd.
IPR013328. DH_multihelical.
IPR016040. NAD(P)-bd_dom.
IPR006398. Tartro_sem_red.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
G3DSA:1.10.1040.10. Opine_DH. 1 hit.
KOK00042.
PANTHERPTHR22981. 3hydroxy_acid_DH. 1 hit.
PfamPF03446. NAD_binding_2. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
TIGRFAMsTIGR01505. Tartro_sem_red. 1 hit.
PROSITEPS00895. 3_HYDROXYISOBUT_DH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1R6L2_ECOUT
AccessionPrimary (citable) accession number: Q1R6L2
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)