Q1R5W6 (Q1R5W6_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-binding protein HU-alpha (HU-2) EMBL ABE09248.1

Gene names

Name:	hupA EMBL ABE09248.1
Ordered Locus Names:	UTI89_C3819

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE09248.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	90 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Ligand	DNA-binding EMBL ABE09248.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1R5W6 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 6B5B8536FDBD13DC	FASTA	90	9,535
	10 20 30 40 50 60 MNKTQLIDVI AEKAELSKTQ AKAALESTLA AITESLKEGD AVQLVGFGTF KVNHRAERTG 70 80 90 RNPQTGKEIK IAAANVPAFV SGKALKDAVK

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE09248.1.
RefSeq	YP_542779.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1R5W6.
SMR	Q1R5W6. Positions 1-90.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1R5W6.
Proteomic databases
PRIDE	Q1R5W6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000065991; EBESCP00000063469; EBESCG00000065038.
GeneID	3990792.
GenomeReviews	Gene locus UTI89_C3819 in contig CP000243_GR.
KEGG	eci:UTI89_C3819.
PATRIC	18457084. VBIEscCol42261_3741.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0776.
GeneTree	EBGT00050000010314.
HOGENOM	HBG705085.
OMA	MNSITYE.
ProtClustDB	PRK10753.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05787.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1R5W6_ECOUT

Accession

Primary (citable) accession number: Q1R5W6

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)