Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q1R586 (Q1R586_ECOUT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.15 EMBL ABE09478.1
Gene names
Name:gadA EMBL ABE09478.1
Ordered Locus Names:UTI89_C4049 EMBL ABE09478.1
OrganismEscherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE09478.1
Taxonomic identifier364106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
Q1R586 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: DF925137BA525680

FASTA48755,201
        10         20         30         40         50         60 
MLPLRINPTF LLPSNKFKEF EMDQKLLTDF RSELLDSRFG AKAISTIAES KRFPLHEMRD 

        70         80         90        100        110        120 
DVAFQIINDE LYLDGNARQN LATFCQTWDD ENVHKLMDLS INKNWIDKEE YPQSAAIDLR 

       130        140        150        160        170        180 
CVNMVADLWH APAPKNGQAV GTNTIGSSEA CMLGGMAMKW RWRKRMEAAG KPTNKPNLVC 

       190        200        210        220        230        240 
GPVQICWHKF ARYWDVELRE IPMRPGQLFM DPKRMIEACD ENTIGVVPTF GVTYTGNYEF 

       250        260        270        280        290        300 
PQPLHDALDK FQADTGIDID MHIDAASGGF LAPFVAPDIV WDFRLPRVKS ISASGHKFGL 

       310        320        330        340        350        360 
APLGCGWVIW RDEEALPQEL VFNVDYLGGQ IGTFAINFSR PAGQVIAQYY EFLRLGREGY 

       370        380        390        400        410        420 
TKVQNASYQV AAYLADEIAK LGPYEFICTG RPDEGIPAVC FKLKDGEDPG YTLYDLSERL 

       430        440        450        460        470        480 
RLRGWQVPAF TLGGEATDIV VMRIMCRRGF EMDFAELLLE DYKASLKYLS DHPKLQGIAQ 


QNSFKHT 

« Hide

References

[1]"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach."
Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I.
Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UTI89 / UPEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000243 Genomic DNA. Translation: ABE09478.1.
RefSeqYP_543009.1. NC_007946.1.

3D structure databases

ProteinModelPortalQ1R586.
SMRQ1R586. Positions 25-473.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING364106.UTI89_C4049.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE09478; ABE09478; UTI89_C4049.
GeneID3991128.
KEGGeci:UTI89_C4049.
PATRIC18457527. VBIEscCol42261_3962.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAMIGRLFN.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycECOL364106:GHPQ-4012-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1R586_ECOUT
AccessionPrimary (citable) accession number: Q1R586
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)