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Protein
Submitted name:

Lipopolysaccharide heptosyltransferase-1

Gene

rfaC

Organism
Escherichia coli (strain UTI89 / UPEC)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseImported, Transferase

Protein family/group databases

CAZyiGT9. Glycosyltransferase Family 9.

Names & Taxonomyi

Protein namesi
Submitted name:
Lipopolysaccharide heptosyltransferase-1Imported (EC:2.4.1.-Imported)
Gene namesi
Name:rfaCImported
Ordered Locus Names:UTI89_C4166Imported
OrganismiEscherichia coli (strain UTI89 / UPEC)Imported
Taxonomic identifieri364106 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000001952 Componenti: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GT1X-ray1.90A/B1-326[»]
ProteinModelPortaliQ1R4X0.
SMRiQ1R4X0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ1R4X0.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000257134.
KOiK02841.
OMAiEIPAWHP.

Family and domain databases

InterProiIPR002201. Glyco_trans_9.
IPR011908. LipoPS_heptosylTferase-I.
[Graphical view]
PfamiPF01075. Glyco_transf_9. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02193. heptsyl_trn_I. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1R4X0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVLIVKTSS MGDVLHTLPA LTDAQQAIPG IKFDWVVEEG FAQIPSWHAA
60 70 80 90 100
VERVIPVAIR RWRKAWFSAP IKAERKAFRE ALQAKNYDAV IDAQGLVKSA
110 120 130 140 150
ALVTRLAHGV KHGMDWQTAR EPLASLFYNR KHHIAKQQHA VERTRELFAK
160 170 180 190 200
SLGYSKPQTQ GDYAIAQHFL TNLPTDAGEY AVFLHATTRD DKHWPEEHWR
210 220 230 240 250
ELIGLLADSG IRIKLPWGAP HEEERAKRLA EGFAYVEVLP KMSLEGVARV
260 270 280 290 300
LAGAKFVVSV DTGLSHLTAA LDRPNITVYG PTDPGLIGGY GKNQMVCRAP
310 320
GNELSQLTAN AVKQFIEENA EKAAMI
Length:326
Mass (Da):36,222
Last modified:May 16, 2006 - v1
Checksum:iAD6244082C5C133E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000243 Genomic DNA. Translation: ABE09594.1.
RefSeqiWP_001264595.1. NC_007946.1.

Genome annotation databases

EnsemblBacteriaiABE09594; ABE09594; UTI89_C4166.
KEGGieci:UTI89_C4166.
PATRICi18457754. VBIEscCol42261_4074.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000243 Genomic DNA. Translation: ABE09594.1.
RefSeqiWP_001264595.1. NC_007946.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2GT1X-ray1.90A/B1-326[»]
ProteinModelPortaliQ1R4X0.
SMRiQ1R4X0.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT9. Glycosyltransferase Family 9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE09594; ABE09594; UTI89_C4166.
KEGGieci:UTI89_C4166.
PATRICi18457754. VBIEscCol42261_4074.

Phylogenomic databases

HOGENOMiHOG000257134.
KOiK02841.
OMAiEIPAWHP.

Miscellaneous databases

EvolutionaryTraceiQ1R4X0.

Family and domain databases

InterProiIPR002201. Glyco_trans_9.
IPR011908. LipoPS_heptosylTferase-I.
[Graphical view]
PfamiPF01075. Glyco_transf_9. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02193. heptsyl_trn_I. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ1R4X0_ECOUT
AccessioniPrimary (citable) accession number: Q1R4X0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.