Q1R2J1 (Q1R2J1_ECOUT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
UxuR uxu operon transcriptional regulator EMBL ABE10423.1

Gene names

Name:	uxuR EMBL ABE10423.1
Ordered Locus Names:	UTI89_C5020

Organism

Escherichia coli (strain UTI89 / UPEC) [Complete proteome] [HAMAP] EMBL ABE10423.1

Taxonomic identifier

364106 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	257 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. RuleBase RU000706

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000706
Ligand	DNA-binding RuleBase RU000706
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1R2J1 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 4E91A2997043A160	FASTA	257	29,260
	10 20 30 40 50 60 MKSATSAQRP YQEVGAMIRD LIIKTPYNPG ERLPPEREIA EMLDVTRTVV REALIMLEIK 70 80 90 100 110 120 GLVEVRRGAG IYVLDSSGSH NADSPDANVC NDAGPFELLQ ARQLLESNIA EFAALQATRE 130 140 150 160 170 180 DIVKMRKALQ LEERELASSA PGSSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM 190 200 210 220 230 240 WIQLHSHLDD SLYRKEWLGD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI 250 YFDGYLFDSW PLDKVDA

References

[1]

"Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach." Chen S.L., Hung C.-S., Xu J., Reigstad C.S., Magrini V., Sabo A., Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R., Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R., Hultgren S.J., Gordon J.I. Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006) [PubMed: 16585510] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000243 Genomic DNA. Translation: ABE10423.1.
RefSeq	YP_543954.1. NC_007946.1.
3D structure databases
ProteinModelPortal	Q1R2J1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1R2J1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBESCT00000066683; EBESCP00000064161; EBESCG00000065730.
GeneID	3992238.
GenomeReviews	Gene locus UTI89_C5020 in contig CP000243_GR.
KEGG	eci:UTI89_C5020.
PATRIC	18459435. VBIEscCol42261_4889.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2186.
GeneTree	EBGT00050000009602.
HOGENOM	HBG700007.
OMA	ENIVNRT.
ProtClustDB	PRK10225.
Family and domain databases
InterPro	IPR011711. GntR_C. IPR000524. Tscrpt_reg_HTH_GntR. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
KO	K13637.
Pfam	PF07729. FCD. 1 hit. PF00392. GntR. 1 hit. [Graphical view]
PRINTS	PR00035. HTHGNTR.
SMART	SM00895. FCD. 1 hit. SM00345. HTH_GNTR. 1 hit. [Graphical view]
PROSITE	PS50949. HTH_GNTR. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1R2J1_ECOUT

Accession

Primary (citable) accession number: Q1R2J1

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)