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Q1QY29 (Q1QY29_CHRSD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ABE58629.1
EC=3.5.1.28 EMBL ABE58629.1
Gene names
Ordered Locus Names:Csal_1274
OrganismChromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) [Complete proteome] [HAMAP] EMBL ABE58629.1
Taxonomic identifier290398 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Halomonadaceae › Chromohalobacter

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4141 Potential EMBL ABE58629.1
Chain42 – 497456 Potential EMBL ABE58629.1
PRO_5000112689

Sequences

Sequence LengthMass (Da)Tools
Q1QY29 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: A021851DCE2F2CEF

FASTA49754,174
        10         20         30         40         50         60 
MTLYPAMPRR AMRVMRTFRR SMSLALLTLL TLAQLTSAHA AEVDNIRTWA APDHVRVVFD 

        70         80         90        100        110        120 
LSDEAESSIF MLDDPRRLVV DLEDTRLAFD PGEVEPGDSA IEALRTGVRN GDDLRVVLDL 

       130        140        150        160        170        180 
GREVVPHHFM LPPTDQYGHR LVVDLDYPGE SALDEPIDPI AAMIRDQEMS AERALVEAKA 

       190        200        210        220        230        240 
QGKDPDEVLA RQDSQAKPHP KRDIIIAVDP GHGGEDPGAI GPDGTYEKNV VLAIARKLNA 

       250        260        270        280        290        300 
KLNNTPGFKA FLTRDGDYYV GLRQRTLLAR KQKADFFVSV HADAVKSRGP SGSSVYALSK 

       310        320        330        340        350        360 
HGATSESARW LAASENRADL IGGVDGSLDL SDKDEVLRGV LLDLTMTATM NESLSTGGQV 

       370        380        390        400        410        420 
LDQLGRVNRL HKSQVEQAGF VVLKSPDIPS LLVETGFISN PSEERRLLSS PFQAKLADAI 

       430        440        450        460        470        480 
GTGIIAHFRQ NPPPSSLLAW QRDQGRGSGP GEYRVQAGDT LSEVASRHDV TMLALKEAND 

       490 
LNGDILRVGQ VLKIPQS

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References

[1]"Complete sequence of Chromohalobacter salexigens DSM 3043."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Saunders E., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Csonka L.N., O'Conner K., Vreeland R.H., Oren A., Vargas C., Nieto J., Arahal D.R., Goodner B., Wheeler C., Hall P., Ewing A., Benson L., McBeath D., Canovas D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 3043 / ATCC BAA-138 / NCIMB 13768.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000285 Genomic DNA. Translation: ABE58629.1.
RefSeqYP_573328.1. NC_007963.1.

3D structure databases

ProteinModelPortalQ1QY29.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1QY29.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4027747.
GenomeReviewsGene locus Csal_1274 in contig CP000285_GR.
KEGGcsa:Csal_1274.
NMPDRfig|290398.4.peg.1264.
PATRIC21446330. VBIChrSal113723_1287.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0860.
HOGENOMHBG656726.
OMAVWPAEDY.

Family and domain databases

InterProIPR021731. AMIN.
IPR002508. CW_Hdrlase/autolysin_cat.
IPR018392. Peptidoglycan-bd_lysin.
IPR002482. Peptidoglycan-bd_Lysin_subgr.
[Graphical view]
Gene3DG3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KOK01448.
PfamPF01520. Amidase_3. 1 hit.
PF11741. AMIN. 1 hit.
PF01476. LysM. 1 hit.
[Graphical view]
SMARTSM00646. Ami_3. 1 hit.
SM00257. LysM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QY29_CHRSD
AccessionPrimary (citable) accession number: Q1QY29
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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