Reviewed, UniProtKB/Swiss-Prot Q1QXY5 (DADA_CHRSD)

Names and origin

Protein names

Recommended name:
    D-amino acid dehydrogenase small subunit
    EC=1.4.99.1

Gene names

Name:	dadA
Ordered Locus Names:	Csal_1318

Organism

Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) [Complete proteome] [HAMAP]

Taxonomic identifier

290398 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Oceanospirillales › Halomonadaceae › Chromohalobacter

Protein attributes

Sequence length	419 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity.
Catalytic activity	A D-amino acid + H(2)O + acceptor = a 2-oxo acid + NH(3) + reduced acceptor.
Cofactor	FAD By similarity.
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1.
Subunit structure	Heterodimer of a small and a large subunit By similarity.
Sequence similarities	Belongs to the dadA oxidoreductase family.

Ontologies

Keywords
Ligand	FAD Flavoprotein
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 419	419	D-amino acid dehydrogenase small subunit		PRO_1000066087
Regions
	Nucleotide binding	3 – 17	15	FAD Potential

Sequences

	Sequence		Length	Mass (Da)
	Q1QXY5-1 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 462BEA94DCFF7B00	FASTA	419	46,286
	10 20 30 40 50 60 MQVLILGSGV VGVTSAYYLA TQGHEVTVVD RREAPAMETS YGNAGQVSFG FSSPWAAPGI 70 80 90 100 110 120 PRKALKWMFQ EHAPLKIQPK RDPAMARFMM AMFNNCTPER YAVNKERMVR VAEYSRQCID 130 140 150 160 170 180 ALRRDTGIRY EDRQRGLLQL FRHESQVEAA GKDMRVLSEC GVRHRLLGAE ELVTAEPALA 190 200 210 220 230 240 RVPGKFVGGL HLPDDQTGDC HLFTQRLAEH CREHLGVTFR FGVDVQRIER QAGRVERVVT 250 260 270 280 290 300 SAGSLRADAY VVCLGSFSPL LVKDLDIRLP IYPVKGYSLT LPVTDDGGAP QSTVMDETFK 310 320 330 340 350 360 VAISRFDDRI RVGGTAELAS YDLSLLEKRR ATISMVVRDV FPEGGDAAKA EFWTGLRPMT 370 380 390 400 410 PDSTPIIGAT RYDNLWLNTG HGTLGWTMSC GSAHLLADLM AGRRPAIDPI GLDVSRYAA

References

[1]

"Complete sequence of Chromohalobacter salexigens DSM 3043." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Saunders E., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Csonka L.N., O'Conner K., Vreeland R.H., Oren A., Vargas C., Nieto J., Arahal D.R., Goodner B., Wheeler C., Hall P., Ewing A., Benson L., McBeath D., Canovas D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000285 Genomic DNA. Translation: ABE58673.1.
RefSeq	YP_573372.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4027772.
GenomeReviews	Gene locus Csal_1318 in contig CP000285_GR.
KEGG	csa:Csal_1318.
NMPDR	fig|290398.4.peg.1308.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q1QXY5.
Enzyme and pathway databases
BioCyc	CSAL290398:CSAL_1318-MON.
Family and domain databases
HAMAP	MF_01202. [Tree]
InterPro	IPR006076. FAD-dep_OxRdtase. [Graphical view]
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProDom	PD000139. FAD_pyr_redox. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

DADA_CHRSD

Accession

Primary (citable) accession number: Q1QXY5

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 5, 2008
Last sequence update:	May 16, 2006
Last modified:	November 4, 2008
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)