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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Nitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi11 – 166FADUniRule annotation
Nucleotide bindingi270 – 28415NADUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Enzyme and pathway databases

BioCyciNHAM323097:GHP7-106-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:Nham_0105
OrganismiNitrobacter hamburgensis (strain DSM 10229 / NCIMB 13809 / X14)
Taxonomic identifieri323097 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter
Proteomesi
  • UP000001953 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 624624tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGPRO_1000016627Add
BLAST

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi323097.Nham_0105.

Structurei

3D structure databases

ProteinModelPortaliQ1QRZ1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1QRZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTASFDVIVI GGGHAGCEAA TAAARMGART ALVTHRLSTV GAMSCNPAIG
60 70 80 90 100
GLGKGHLVRE IDALDGLMGR VADAAGIQFR MLNRRKGPAV RGPRAQEDRK
110 120 130 140 150
LYAAAMQAEI REAANLVVIE GEADDLIVAD GRIAGIRLID SRAFKTGAVV
160 170 180 190 200
VTTGTFLRGL IHLGEKSWPA GRVDEAPALG LSVSFERIGF TLGRLKTGTP
210 220 230 240 250
PRLDGATIDW AAVEMQPGDD PPEPFSVMTS RITTPQIRCG ITRTMPATHE
260 270 280 290 300
VIRANVHRSP IYSGQIRSSG PRYCPSLEDK VVRFGDRDGH QIFLEPEGLD
310 320 330 340 350
DTTVYPNGIS TSLPEEVQLA ILATIPGLTK VRMIRPGYAI EYDHVDPREL
360 370 380 390 400
DPTLQTRRLP GLFLAGQING TTGYEEAAAQ GLVAGLNAAL AAGGGDPVVF
410 420 430 440 450
DRADGYLGVM IDDLVTRGIT EPYRMFTSRA EYRLTLRADN ADQRLTDKGI
460 470 480 490 500
AMGCVGAGRA VHHRAKMAAL SAAKALATSL SVTPNEAARY GLSLNRDGHR
510 520 530 540 550
RSAFELLAYP EIGWGEVAAI WPELSAIDPG VAVHLEIDAK YDVYLKRQTA
560 570 580 590 600
DVEAFRRDES LVLADVDYDA VPGLSNEARA RLERARPRTV GQAGRLDGIT
610 620
PAALGILAAY LRREARKKTA TASA
Length:624
Mass (Da):66,777
Last modified:May 16, 2006 - v1
Checksum:iD8AB2256E646BD2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000319 Genomic DNA. Translation: ABE61006.1.
RefSeqiWP_011508713.1. NC_007964.1.

Genome annotation databases

EnsemblBacteriaiABE61006; ABE61006; Nham_0105.
KEGGinha:Nham_0105.
PATRICi22687527. VBINitHam61822_0806.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000319 Genomic DNA. Translation: ABE61006.1.
RefSeqiWP_011508713.1. NC_007964.1.

3D structure databases

ProteinModelPortaliQ1QRZ1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi323097.Nham_0105.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE61006; ABE61006; Nham_0105.
KEGGinha:Nham_0105.
PATRICi22687527. VBINitHam61822_0806.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Enzyme and pathway databases

BioCyciNHAM323097:GHP7-106-MONOMER.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_NITHX
AccessioniPrimary (citable) accession number: Q1QRZ1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 16, 2006
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.