Q1QQV5 (RL28_NITHX) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L28

Gene names

Name:	rpmB
Ordered Locus Names:	Nham_0502

Organism

Nitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]

Taxonomic identifier

323097 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L28P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 97	97	50S ribosomal protein L28 HAMAP MF_00373		PRO_1000007285

Sequences

	Sequence		Length	Mass (Da)
	Q1QQV5 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 645BB60753F960A1	FASTA	97	10,760
	10 20 30 40 50 60 MSRRCELTAK APMVGHKVSH SNIKTKRRFL PNLVNVTFLS EALASPVRLR VSTHALKSVD 70 80 90 HRGGFDAFLL KAKNAELSPK AIEIKRRIEK KQAANAG

References

[1]

"Complete sequence of chromosome of Nitrobacter hamburgensis X14." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 / DSM 10229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000319 Genomic DNA. Translation: ABE61392.1.
RefSeq	YP_575852.1. NC_007964.1.
3D structure databases
ProteinModelPortal	Q1QQV5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1QQV5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4029930.
GenomeReviews	Gene locus Nham_0502 in contig CP000319_GR.
KEGG	nha:Nham_0502.
NMPDR	fig|323097.3.peg.119.
PATRIC	22688409. VBINitHam61822_1243.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0227.
HOGENOM	HBG597003.
OMA	ELSMRAR.
PhylomeDB	Q1QQV5.
ProtClustDB	PRK00359.
Enzyme and pathway databases
BioCyc	NHAM323097:NHAM_0502-MONOMER.
Family and domain databases
HAMAP	MF_00373. Ribosomal_L28. [Tree]
InterPro	IPR001383. Ribosomal_L28. [Graphical view]
KO	K02902.
Pfam	PF00830. Ribosomal_L28. 1 hit. [Graphical view]
TIGRFAMs	TIGR00009. L28. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL28_NITHX

Accession

Primary (citable) accession number: Q1QQV5

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	May 16, 2006
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program