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Q1QQ44 (Q1QQ44_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Nham_0772 EMBL ABE61653.1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE61653.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABE61653.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL ABE61653.1
Chain35 – 561527 Potential EMBL ABE61653.1
PRO_5000117512

Sequences

Sequence LengthMass (Da)Tools
Q1QQ44 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 99FEC4B64AF1058F

FASTA56158,822
        10         20         30         40         50         60 
MMLSRLSIRA KIISAISFLL LAMAAMGTLS VLEMETIHDR AVDLRTNWLP SVRELGELRA 

        70         80         90        100        110        120 
NTIAYGAAVR SHLLAADAAG KDAAEKTLDT AGQAVDETRK AYEAMITAPD ERRIYDAFST 

       130        140        150        160        170        180 
QWTSYVAGVR ELLAVSRKGD LQASLDLNDR KIEPVGRTAD DTLREGIALN HKEADAAGHA 

       190        200        210        220        230        240 
ASRSYNSAFT IVVAIVSLAL IFGIGIGIYL VRDISHAIAS IVAPMRKLGA GDLSAVVPHQ 

       250        260        270        280        290        300 
GEKNEVGTMA DALQIFKNAL IAKKAADEAA AQDADAKIRR AQRVDTLTRQ FESMIGELVG 

       310        320        330        340        350        360 
SLSSSSTELE AAANTLTTTA ETTGRTSGEA AAASQEVSSN VQSVASATEE ITSSVHEIGR 

       370        380        390        400        410        420 
QVQEASRVAG DAVRQAEQTD SNIAELSQAA GRIGDVVKLI TAVAEQTNLL ALNATIEAAR 

       430        440        450        460        470        480 
AGDAGRGFAV VASEVKTLAA QTAKATDEIS AQITDIQAAT RDSVTAIREI GTTIKLISEI 

       490        500        510        520        530        540 
SSAIAAAVEE QGAATQEIAR NVQHAAQRSG EVASSITEVS RGAGETGSAS SQVLSSAQML 

       550        560 
STESTRLKTE VENFLHTVRA A 

« Hide

References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000319 Genomic DNA. Translation: ABE61653.1.
RefSeqYP_576113.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QQ44.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323097.Nham_0772.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE61653; ABE61653; Nham_0772.
GeneID4031456.
KEGGnha:Nham_0772.
PATRIC22689036. VBINitHam61822_1545.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148079.
KOK03406.
OMARADEEAY.
OrthoDBEOG6TR09S.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-790-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF47170. SSF47170. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QQ44_NITHX
AccessionPrimary (citable) accession number: Q1QQ44
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)