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Q1QPF4 (Q1QPF4_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Nham_1045 EMBL ABE61893.1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE61893.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1QPF4 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 3A47D1B71624B384

FASTA56460,603
        10         20         30         40         50         60 
MRKNFPVTDD EYPVSDETLI VSRTDLKGRL SYVNEDFIDA AEFTSEELIG KAHNIVRHPD 

        70         80         90        100        110        120 
MPAEAFEDLW DTLKAEKPWV GAIKNRRKNG GFYWVLASAS PLRQNGQVTG YTSIRTKLAA 

       130        140        150        160        170        180 
DQRALAEDVY AAIREKRPHQ YRIDAGIIRK RSFFDRFGLF TRTIRARMTT LIALQAAFLL 

       190        200        210        220        230        240 
TCGVLGATVA GGTWGLVLGL LAIAGVAVGG IVGRQTLRAF EGPMQHLNET MLNLVYDKFD 

       250        260        270        280        290        300 
NRIEIKRDDE IGEALRNLQT VQTLIRFSRE EVNSTQRRAE AQRKTDMTRI ADSFEAAIGE 

       310        320        330        340        350        360 
IVGAVATSAT ELEASATTLA SNADHAKDFA ARVANGSTEA SSNVNSVASA TEQMTASVRE 

       370        380        390        400        410        420 
ISQRVQESAR MAGDAVDQVH SATERVSALS SAASRIGDIV EMINNIAGQT NLLALNATIE 

       430        440        450        460        470        480 
AARAGEAGRG FSVVASEVKA LAEQTGKATG EIGQQISGIQ SATQESVAAI NEIRNSIEKL 

       490        500        510        520        530        540 
SGISSTIASA IEEQGATTQE VSRNVQHAAQ GAQEVSSNVG NLQRGAAETG TASSQVLSAA 

       550        560 
QTLSRDSARL KAEVNNFLNS VRVA 

« Hide

References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000319 Genomic DNA. Translation: ABE61893.1.
RefSeqYP_576353.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QPF4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323097.Nham_1045.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE61893; ABE61893; Nham_1045.
GeneID4031651.
KEGGnha:Nham_1045.
PATRIC22689623. VBINitHam61822_1838.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000148079.
OMAARDSCDK.
OrthoDBEOG67HJQK.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-1064-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QPF4_NITHX
AccessionPrimary (citable) accession number: Q1QPF4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)