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Q1QPB9 (Q1QPB9_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Nham_1080 EMBL ABE61928.1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE61928.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter

Protein attributes

Sequence length698 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABE61928.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL ABE61928.1
Chain33 – 698666 Potential EMBL ABE61928.1
PRO_5000117554

Sequences

Sequence LengthMass (Da)Tools
Q1QPB9 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 84608B493AB37998

FASTA69873,693
        10         20         30         40         50         60 
MKAKISVTLP AIISALVLIG ALAAGMAAYQ AYELRQKSEA FLEVNHISQL LLRSAGQWAV 

        70         80         90        100        110        120 
ERGLTNAPLK SPDALPTELR PQIVNTRQTA DRAFSEAAQL LHGIPAMKSA QTQLSEAEST 

       130        140        150        160        170        180 
FQSFVGFRTR LDENLPKRGS ERSPEVVEGF SPAITKLIDV SGNRLRLTLE TLTRPPTAAL 

       190        200        210        220        230        240 
TQLVSVRNLT AQMAENAGRE RALVGGIVGS RAKISTSSFR TIARFRGNVE LAWETISPLR 

       250        260        270        280        290        300 
MRTDLPKKVT DAISGVEKDY FQTYGQTRDG VFATAETGEY TISGNDYVAR ATTAINSILR 

       310        320        330        340        350        360 
LADAVGEAAD QEATNEAANS TSKLLIAGLI LLGCIALALI SFWIAFSRIL RPLSALTGAM 

       370        380        390        400        410        420 
GELAKGNFAV VLPGLDRKDE MGDMARAVET FKVKAEQKAR DEAEAKMQQD QLAAQQRKAD 

       430        440        450        460        470        480 
MHRLADSFEA AVGEVIQTVS SAATQLEGSA TSLTRTAEQT HQLSSAVAAA SEEATVNVQS 

       490        500        510        520        530        540 
VASASEEMAA SVTEISRQVQ EASRIASDAA QKAHSADQRI TSLSQASTKI GDVVELINTI 

       550        560        570        580        590        600 
ASQTNLLALN ATIEAARAGE AGRGFAVVAS EVKALAEQTA KATAEIGQQI TNIQAATDDS 

       610        620        630        640        650        660 
VVNVKEIGVV IGRIAEISAT IASAVEEQAS ATQEISRNVQ QAAAGTSEVS SNIIEVSNGA 

       670        680        690 
SETGGASTQA LAAAKTLAGN TDRLKLEVEK FLATVRAA 

« Hide

References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000319 Genomic DNA. Translation: ABE61928.1.
RefSeqYP_576388.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QPB9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323097.Nham_1080.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE61928; ABE61928; Nham_1080.
GeneID4031608.
KEGGnha:Nham_1080.
PATRIC22689697. VBINitHam61822_1875.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148079.
OMAELAWETI.
OrthoDBEOG6M6JJS.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-1099-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QPB9_NITHX
AccessionPrimary (citable) accession number: Q1QPB9
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)