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Q1QMJ6 (Q1QMJ6_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Triosephosphate isomerase HAMAP MF_00147
Short name=TIM HAMAP MF_00147
EC=5.3.1.1 HAMAP MF_00147
Alternative name(s):
Triose-phosphate isomerase HAMAP MF_00147
Gene names
Name:tpiA HAMAP MF_00147
Ordered Locus Names:Nham_1736
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147 RuleBase RU000517

Pathway

Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 RuleBase RU003527

Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147 RuleBase RU003527

Subunit structure

Homodimer By similarity. HAMAP MF_00147

Subcellular location

Cytoplasm By similarity HAMAP MF_00147.

Sequence similarities

Belongs to the triosephosphate isomerase family. RuleBase RU004162 HAMAP MF_00147

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site971Electrophile By similarity HAMAP MF_00147
Active site1671Proton acceptor By similarity HAMAP MF_00147
Binding site111Substrate By similarity HAMAP MF_00147
Binding site131Substrate By similarity HAMAP MF_00147

Sequences

Sequence LengthMass (Da)Tools
Q1QMJ6 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 768DE3AF014D7CB2

FASTA25025,501
        10         20         30         40         50         60 
MTGLRPLIAG NWKMNGLKAS ASELGQMIAG AGGPAQKADL LICPPATLVL AFAGAVQGSP 

        70         80         90        100        110        120 
LRIGAQDCHP NPSGAHTGDT SAEMLADSGA TAIIVGHSER RADHGETDAL VRQKAEAAWR 

       130        140        150        160        170        180 
AALIAIVCVG ETQDQRDAGQ TLEVVGRQLA GSLPDGATAA NLVVAYEPVW AIGTGRTPTP 

       190        200        210        220        230        240 
KDVQDVHGFI RDQLTQRFSG EGARIRILYG GSVKPSNAAE LMAVPNVNGA LIGGASLKAT 

       250 
DFLAIAGAVA

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References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000319 Genomic DNA. Translation: ABE62551.1.
RefSeqYP_577011.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QMJ6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1QMJ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4030355.
GenomeReviewsGene locus Nham_1736 in contig CP000319_GR.
KEGGnha:Nham_1736.
NMPDRfig|323097.3.peg.2529.
PATRIC22691144. VBINitHam61822_2594.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0149.
HOGENOMHBG708281.
OMAVCVGETQ.
PhylomeDBQ1QMJ6.
ProtClustDBPRK00042.

Family and domain databases

HAMAPMF_00147_B. TIM_B.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR022896. TrioseP_Isoase_bac/euk.
IPR000652. Triosephosphate_isomerase.
IPR020861. Triosephosphate_isomerase_AS.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01803.
PANTHERPTHR21139. Triophos_ismrse. 1 hit.
PfamPF00121. TIM. 1 hit.
[Graphical view]
SUPFAMSSF51351. Triophos_ismrse. 1 hit.
TIGRFAMsTIGR00419. Tim. 1 hit.
PROSITEPS00171. TIM_1. 1 hit.
PS51440. TIM_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QMJ6_NITHX
AccessionPrimary (citable) accession number: Q1QMJ6
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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