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Q1QMF4 (Q1QMF4_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl transferase, family 2 EMBL ABE62593.1
Gene names
Ordered Locus Names:Nham_1779
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length889 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABE62593.1
   Molecular functionTransferase EMBL ABE62593.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

transferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1717 Potential EMBL ABE62593.1
Chain18 – 889872 Potential EMBL ABE62593.1
PRO_5000117663

Sequences

Sequence LengthMass (Da)Tools
Q1QMF4 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 766C1107070B1722

FASTA88998,309
        10         20         30         40         50         60 
MRAVVAVLLF VTAAHAALWG VLQERQQAPD FKGVLTSVSY APFEGSAHPD VDNIPTADKI 

        70         80         90        100        110        120 
RSDMKALVPL TRAIRLYSST GGVELVPPIA NEFGLKVMVG AWIDKHVERN EREMLAAIDL 

       130        140        150        160        170        180 
AKHNSNVNGI VVGNETIYRG DQKVADLIKL IQRVKGSVNV PVTTGEIWNI WLEHPELASS 

       190        200        210        220        230        240 
VDFIAAHILP YWEGFSSKQA VDQALIIYQK LRDAFPGKRI VIAEFGWPSA GYNLRNADPG 

       250        260        270        280        290        300 
PFQQAVTLRN FVTKAQSIGM EYNIVEAIDQ PWKFFEGGVG PYWGILDADR EPKFSWTGPV 

       310        320        330        340        350        360 
VDQAYWKLAG IALLVGVLLS LPILRLVRPT VMQALLLSTA ANGVGAWVAT VFAYWTGHYF 

       370        380        390        400        410        420 
VFGSAFAMML GMILLVPLIL IAMARIAEIA AVAFGQRPQR LITREAAAEA AQATADNPLP 

       430        440        450        460        470        480 
KVSIHVPAYF EPPEMLKQTL DAVARLDYPN FECVVIINNT PDPAFWQPIQ DHCRALGERF 

       490        500        510        520        530        540 
KFINAEKVEG FKAGALRIAM ERTAADAEII GVIDADYVVQ PDWLRDLVPA FNDPRVGLVQ 

       550        560        570        580        590        600 
APQDHRDGDR TLMHYIMNGE YAGFFDIGMV QRNEANAIIV HGTMCLIRRA AMDMAGGWAG 

       610        620        630        640        650        660 
DTICEDTDLG LAMIEHGWVT HYTNTRYGYG LLPDTYEAFK KQRHRWAYGG FQIVKKHWRR 

       670        680        690        700        710        720 
FLPGASRLSQ DQKREFTLGW LNWLGAESLG VVVAILNLIW VPIVAFADIA IPDKILTLPI 

       730        740        750        760        770        780 
IAAFLVSLIH FVALYRLRVP VKTAQMLGAM VAAMSVQWTV SRAVAQGLIT EHLAFARTSK 

       790        800        810        820        830        840 
GGLSRMSIEF QAFWEAVIGV LLLVGAAVLI ASNQYKEVHE IYIFAGVLVL ESLPFLSAVA 

       850        860        870        880 
IAILETSRIN EFSFWRNARI RSAELIGLRP APMPTSASPP VGPEIRETT

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References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000319 Genomic DNA. Translation: ABE62593.1.
RefSeqYP_577053.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QMF4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ1QMF4.

Protein family/group databases

CAZyGH17. Glycoside Hydrolase Family 17.
GT2. Glycosyltransferase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4032955.
GenomeReviewsGene locus Nham_1779 in contig CP000319_GR.
KEGGnha:Nham_1779.
NMPDRfig|323097.3.peg.2708.
PATRIC22691242. VBINitHam61822_2642.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1215.
HOGENOMHBG320835.
OMAIQHGTMT.
PhylomeDBQ1QMF4.
ProtClustDBCLSK866372.

Family and domain databases

InterProIPR013781. Glyco_hydro_subgr_catalytic.
IPR001173. Glyco_trans_2.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1QMF4_NITHX
AccessionPrimary (citable) accession number: Q1QMF4
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: December 14, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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