Q1QLL6 (Q1QLL6_NITHX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase class II EMBL ABE62881.1
EC=1.17.4.- EMBL ABE62881.1

Gene names

Ordered Locus Names:

Nham_2084

Organism

Nitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]

Taxonomic identifier

323097 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	1263 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABE62881.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1QLL6 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 170DD0FBE452B862	FASTA	1,263	138,905
	10 20 30 40 50 60 MRFQRRYTKD GQSPYAEIDF RLTTSEIRNP DGSVVFRLEN VEVPEFWSQV ASDVLAQKYF 70 80 90 100 110 120 RKAGVAARLK KVEEETVPSW LWRSVPDTEA LSLLPEKERF GSELSSKQVF DRLAGCWTYW 130 140 150 160 170 180 GWKGGYFSSE DDARAFNDEL RYMLARQMVA PNSPQWFNTG LHWAYGVDGP GQGHYYVDFK 190 200 210 220 230 240 TGKMTRSKSS YEHPQPHACF IQGIEDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSRLRG 250 260 270 280 290 300 EGERLSGGGR SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VVVDADHPDI ETYIDWKVKE 310 320 330 340 350 360 EQKVAALVTG SKLNQKHLKA IMKACVNCEG SGDDCFDPEK NPALRREIKL ARRALVNDNV 370 380 390 400 410 420 IKRVIQYARQ GYKDIDFPVY DTDWDSEAYL TVSGQNSNNS VSLRDDFLRA VETDGDWNLI 430 440 450 460 470 480 GRTNKKVMKT LKARDLWEKI GYAAWASADP GLHFNTTMND WHTCKASGDI RASNPCSEYM 490 500 510 520 530 540 FLDDTACNLA SANLITFYDT ALKRFDVDAY EHVCRLWTVV LEISVLMAQF PSKAIAELSY 550 560 570 580 590 600 EFRTLGLGFA NIGGLLMTMG LPYDSKEGRA LCGALTAIMT GIAYKTSAEM AGELGAFHGY 610 620 630 640 650 660 KKNTGHMLRV IRNHRRAALG QSHGYEALAV NPVPLDHASC PQADLIVHAT KAWDDALALG 670 680 690 700 710 720 EQHGYRNAQV TVVAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYWKI INRAVPEALR 730 740 750 760 770 780 VLGYRESEIA EIEAYAVGHG SLSNAPGINV STLKAKGFTD EAIAKVEKAL PTAFDIKFAF 790 800 810 820 830 840 NKWTFGEDFI RDTLGIDSET IASPTFDLLA AVGFSKREIE AANVHICGAM TVEGAPHLKA 850 860 870 880 890 900 EHYAVFDCAN PCGKIGKRYL SVESHIRMMA ASQPFISGAI SKTINMPNDA TVDDCKSAYL 910 920 930 940 950 960 LSWKLALKAN ALYRDGSKLS QPLNSQLISD DDEEDDAIET FYDKPMAART AQVSERVVEK 970 980 990 1000 1010 1020 LVERIVVLRE REKMPDRRKG YTQKAVVGGH KVYVRTGEYD DGRIGEIFID MHKEGAALRS 1030 1040 1050 1060 1070 1080 FINNFAIAVS LGLQYGVPLE EYVDAFTFTR FEPAGPVQGN DSIKYATSIL DYVFRELAVS 1090 1100 1110 1120 1130 1140 YMGRYDLAHV DPSESGFDAI GKGVAEGKEP EGQQATRYVS KGLTRSRTDN LVVMRGSSSS 1150 1160 1170 1180 1190 1200 PLGGEGSARS VSTSPSPLAG EDRGGGANVT ALSSSRMGDT LEGATALKQE APHDLSPTER 1210 1220 1230 1240 1250 1260 LKQQQRSKAG APAQAAPSKA ERRAEAKAKG YEGEMCSECG NFTLVRNGTC MKCDTCGSTT GCS

References

[1]

"Complete sequence of chromosome of Nitrobacter hamburgensis X14." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 / DSM 10229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000319 Genomic DNA. Translation: ABE62881.1.
RefSeq	YP_577341.1. NC_007964.1.
3D structure databases
ProteinModelPortal	Q1QLL6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1QLL6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4030939.
GenomeReviews	Gene locus Nham_2084 in contig CP000319_GR.
KEGG	nha:Nham_2084.
NMPDR	fig|323097.3.peg.2912.
PATRIC	22691906. VBINitHam61822_2970.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0209.
HOGENOM	HBG414188.
OMA	FLWRSVP.
PhylomeDB	Q1QLL6.
ProtClustDB	PRK07562.
Family and domain databases
InterPro	IPR002876. DUF28. IPR017856. Integrase_Zn-bd_dom-like_N. IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
Gene3D	G3DSA:1.10.10.200. Intgrase_N_Zn_bd. 1 hit.
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 2 hits. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
SUPFAM	SSF75625. DUF28. 1 hit.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1QLL6_NITHX

Accession

Primary (citable) accession number: Q1QLL6

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	December 14, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)