Q1QL04 (Q1QL04_NITHX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ABE63093.1
EC=6.1.1.6 EMBL ABE63093.1

Gene names

Ordered Locus Names:

Nham_2301

Organism

Nitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]

Taxonomic identifier

323097 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	345 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1QL04 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 18F5B8D48F2D9396	FASTA	345	38,181
	10 20 30 40 50 60 MNRISPWWDR ARHADRRAFL QARVAVTRAL RAWFDAQGFV EVETGVLQAS PGNETHLHAP 70 80 90 100 110 120 RTTLTSPAGD QVTRYLRTSP EFACKKLLAA GEQKVVEFAR VFRDRERGDL HLAEFTMLEW 130 140 150 160 170 180 YRAGRSYDVI MADCIAVIAR AAKATGIGAF SFRGRHADPF AEPELLTVAA AFDRFAGIDL 190 200 210 220 230 240 LKTVVGGEGD RAALAAQARV RIADDDTWSD IFSKVLVEHV EPRLGQGRLT ILSKYPAPEA 250 260 270 280 290 300 ALARIDPADS RVAERFEIYA CGVELANGFG ELTDAAEQRI RFNRAMDDKQ SRYGERYPLD 310 320 330 340 EDFLAAVAQM PEASGVALGF DRLVMLASGA LRIDQVVWTP PAEDA

References

[1]

"Complete sequence of chromosome of Nitrobacter hamburgensis X14." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 / DSM 10229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000319 Genomic DNA. Translation: ABE63093.1.
RefSeq	YP_577553.1. NC_007964.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q1QL04.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4029673.
GenomeReviews	Gene locus Nham_2301 in contig CP000319_GR.
KEGG	nha:Nham_2301.
NMPDR	fig|323097.3.peg.2281.
PATRIC	22692388. VBINitHam61822_3203.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2269.
HOGENOM	HBG631383.
OMA	MPEASGI.
PhylomeDB	Q1QL04.
ProtClustDB	CLSK864945.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1QL04_NITHX

Accession

Primary (citable) accession number: Q1QL04

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)