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Q1QJY6 (Q1QJY6_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Squalene cyclase EMBL ABE63461.1
EC=5.4.99.17 EMBL ABE63461.1
Gene names
Ordered Locus Names:Nham_2682 EMBL ABE63461.1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE63461.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter ›

Protein attributes

Sequence length654 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ABE63461.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processhopanoid biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsqualene-hopene cyclase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1QJY6 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 8013080A49759887

FASTA65472,527
        10         20         30         40         50         60 
MNSVNATVAP IDDAALGGSI GAATRGLLDL KQPDGHFVFE LEADATIPSE YVLLRHYLGE 

        70         80         90        100        110        120 
PVDAALEAKI AVYLRRIQGA HGGWPLVHDG PFDMSASVKA YFALKMIGDS IDAPHMARAR 

       130        140        150        160        170        180 
EAILSRGGAA NVNVFTRFLL SLFEVLTWRS APVLPIEIML LPMWSPFHIN KISYWARTTM 

       190        200        210        220        230        240 
VPLMVLAALK PRARNPRGIG IRELFLQDPA TVGTPKRAPH QSPAWFTLFN SLDWILRKIE 

       250        260        270        280        290        300 
PLFPKRLRAR AIEKAIAFVE ERLNGEDGLG AIFPPMVNTV MMYDALGFPP EHPPRAVARR 

       310        320        330        340        350        360 
GIDKLLVIGK DEAYCQPCVS PIWDTALTCH ALLEAGGPEA LSGAGKSLDW LLPKQELVLK 

       370        380        390        400        410        420 
GDWAVKRPDV RPGGWAFQYA NAHYPDLDDT AVVVMAMDRV RRNDRSDKYN EAIARGREWI 

       430        440        450        460        470        480 
EGMQSRDGGF AAFDADNLEY YLNNIPFSDH AALLDPPTED VTARCVSMLA QLGETVRSSP 

       490        500        510        520        530        540 
SMAAGVDYLR RTQLKEGSWY GRWGLNYIYG TWSVVCALNA AGVDHQDPAM RKAVDWLVSI 

       550        560        570        580        590        600 
QNADGGWGED AVSYRLDYKG FEGAPTTASQ TAWALLALMA AGEVENPAVA RGMKYLIDTQ 

       610        620        630        640        650 
TKKGLWDEQR FTATGFPRVF YLRYHGYSRF FPLWALARYR NLRSTNSKVV GVGM

« Hide

References

[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000319 Genomic DNA. Translation: ABE63461.1.
RefSeqYP_577921.1. NC_007964.1.

3D structure databases

ProteinModelPortalQ1QJY6.
ModBaseSearch...

Protein-protein interaction databases

STRING323097.Nham_2682.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE63461; ABE63461; Nham_2682.
GeneID4032380.
KEGGnha:Nham_2682.
PATRIC22693235. VBINitHam61822_3622.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1657.
HOGENOMHOG000220823.
KOK06045.
OMARRIQGAH.
ProtClustDBCLSK2393506.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-2750-MONOMER.

Family and domain databases

InterProIPR006400. Hopene-cyclase.
IPR001330. Prenyltrans.
IPR018333. Squalene_cyclase.
IPR002365. Terpene_synthase_CS.
IPR008930. Terpenoid_cyclase/PrenylTrfase.
[Graphical view]
PfamPF00432. Prenyltrans. 1 hit.
[Graphical view]
SUPFAMSSF48239. Terp_cyc_toroid. 2 hits.
TIGRFAMsTIGR01507. hopene_cyclase. 1 hit.
TIGR01787. squalene_cyclas. 1 hit.
PROSITEPS01074. TERPENE_SYNTHASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ1QJY6_NITHX
AccessionPrimary (citable) accession number: Q1QJY6
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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