Q1QGE2 (RS20_NITHX) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	Nham_4039

Organism

Nitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP]

Taxonomic identifier

323097 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter

Protein attributes

Sequence length	88 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 88	88	30S ribosomal protein S20 HAMAP MF_00500		PRO_0000260129

Sequences

	Sequence		Length	Mass (Da)
	Q1QGE2 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: E587D333F6E226EF	FASTA	88	9,874
	10 20 30 40 50 60 MANTHSAKKA TRKITRRTAV NKSRRTLMRG SVRIVEEAIA KGDRDAAIQA MKRAEPELMR 70 80 AGQQNIVHKN SASRKVSRLT HRIAKLAK

References

[1]

"Complete sequence of chromosome of Nitrobacter hamburgensis X14." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 / DSM 10229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000319 Genomic DNA. Translation: ABE64705.1.
RefSeq	YP_579165.1. NC_007964.1.
3D structure databases
ProteinModelPortal	Q1QGE2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q1QGE2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4032763.
GenomeReviews	Gene locus Nham_4039 in contig CP000319_GR.
KEGG	nha:Nham_4039.
NMPDR	fig|323097.3.peg.3803.
PATRIC	22696282. VBINitHam61822_5128.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0268.
HOGENOM	HBG734145.
OMA	RTQMRGA.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	NHAM323097:NHAM_4039-MONOMER.
Family and domain databases
HAMAP	MF_00500. Ribosomal_S20. [Tree]
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Gene3D	G3DSA:1.20.58.110. Ribosomal_S20. 1 hit.
KO	K02968.
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_NITHX

Accession

Primary (citable) accession number: Q1QGE2

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 28, 2006
Last sequence update:	May 16, 2006
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program