Q1QGD3 (Q1QGD3_NITHX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose 1,5-bisphosphate carboxylase small subunit EMBL ABE64714.1
EC=4.1.1.39 EMBL ABE64714.1

Gene names

Ordered Locus Names:

Nham_3750 EMBL ABE64474.1, Nham_4050 EMBL ABE64714.1

Encoded on

Plasmid pNITHX1 Ref.2 Ref.3
Plasmid 1 EMBL ABE64714.1

Organism

Nitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE64714.1

Taxonomic identifier

323097 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Nitrobacter › Nitrobacter hamburgensis

Protein attributes

Sequence length	141 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABE64714.1
Technical term	Complete proteome Plasmid EMBL ABE64714.1
Gene Ontology (GO)
Molecular_function	ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1QGD3 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 087DBC9ED25E709C	FASTA	141	16,593
	10 20 30 40 50 60 MRITQGCFSF LPDLTDEQIS KQIQYCLTQG WAVNIEFTDD PHPRNTYWDM WNLPMFDLKD 70 80 90 100 110 120 AAGVLMELNE CRKVYGDRYI RMSAFDSSHG WESVKISFIV NRPKDEPGFR LERQESDNRN 130 140 IRYTTTSYAV TARPEGQRYS S

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of chromosome of Nitrobacter hamburgensis X14." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 EMBL ABE64474.1 and X14 / DSM 10229.
[2]	"Complete sequence of plasmid 1 of Nitrobacter hamburgensis X14." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X14 / DSM 10229.
[3]	"Complete sequence of Plasmid1 of Nitrobacter hamburgensis X14." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: X14 EMBL ABE64714.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000319 Genomic DNA. Translation: ABE64474.1. CP000320 Genomic DNA. Translation: ABE64714.1.
RefSeq	YP_571546.1. NC_007959.1. YP_578934.1. NC_007964.1.
3D structure databases
SMR	Q1QGD3. Positions 1-129.
ModBase	Search...
Protein-protein interaction databases
STRING	323097.Nham_4050.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE64474; ABE64474; Nham_3750. ABE64714; ABE64714; Nham_4050.
GeneID	4025376. 4032487.
KEGG	nha:Nham_3750. nha:Nham_4050.
PATRIC	22685935. VBINitHam61822_0014.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4451.
HOGENOM	HOG000141331.
KO	K01602.
OMA	WAVNIEF.
ProtClustDB	CLSK892105.
Enzyme and pathway databases
BioCyc	NHAM323097:GHP7-3816-MONOMER. NHAM323097:GHP7-4436-MONOMER.
Family and domain databases
Gene3D	3.30.190.10. 1 hit.
InterPro	IPR000894. RuBisCO_sc_dom. [Graphical view]
Pfam	PF00101. RuBisCO_small. 1 hit. [Graphical view]
SMART	SM00961. RuBisCO_small. 1 hit. [Graphical view]
SUPFAM	SSF55239. RuBisCO_small. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q1QGD3_NITHX

Accession

Primary (citable) accession number: Q1QGD3

Entry history

Integrated into UniProtKB/TrEMBL:	May 16, 2006
Last sequence update:	May 16, 2006
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)