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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase small subunit

Gene

Nham_3750

Organism
Nitrobacter hamburgensis (strain X14 / DSM 10229)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciNHAM323097:GHP7-3811-MONOMER.
NHAM323097:GHP7-4116-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Nham_3750Imported, Nham_4050Imported
Encoded oniPlasmid 1Imported
Plasmid pNITHX1Imported
OrganismiNitrobacter hamburgensis (strain X14 / DSM 10229)Imported
Taxonomic identifieri323097 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter
ProteomesiUP000001953 Componentsi: Chromosome, Plasmid pNITHX1

Interactioni

Protein-protein interaction databases

STRINGi323097.Nham_3750.

Structurei

3D structure databases

ProteinModelPortaliQ1QGD3.
SMRiQ1QGD3. Positions 1-129.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141331.
KOiK01602.
OMAiYIPAVEF.
OrthoDBiEOG6RC3Q7.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1QGD3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRITQGCFSF LPDLTDEQIS KQIQYCLTQG WAVNIEFTDD PHPRNTYWDM
60 70 80 90 100
WNLPMFDLKD AAGVLMELNE CRKVYGDRYI RMSAFDSSHG WESVKISFIV
110 120 130 140
NRPKDEPGFR LERQESDNRN IRYTTTSYAV TARPEGQRYS S
Length:141
Mass (Da):16,593
Last modified:May 16, 2006 - v1
Checksum:i087DBC9ED25E709C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000319 Genomic DNA. Translation: ABE64474.1.
CP000320 Genomic DNA. Translation: ABE64714.1.
RefSeqiWP_011505021.1. NC_007964.1.
YP_571546.1. NC_007959.1.
YP_578934.1. NC_007964.1.

Genome annotation databases

EnsemblBacteriaiABE64474; ABE64474; Nham_3750.
ABE64714; ABE64714; Nham_4050.
KEGGinha:Nham_3750.
nha:Nham_4050.
PATRICi22685935. VBINitHam61822_0014.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000319 Genomic DNA. Translation: ABE64474.1.
CP000320 Genomic DNA. Translation: ABE64714.1.
RefSeqiWP_011505021.1. NC_007964.1.
YP_571546.1. NC_007959.1.
YP_578934.1. NC_007964.1.

3D structure databases

ProteinModelPortaliQ1QGD3.
SMRiQ1QGD3. Positions 1-129.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi323097.Nham_3750.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE64474; ABE64474; Nham_3750.
ABE64714; ABE64714; Nham_4050.
KEGGinha:Nham_3750.
nha:Nham_4050.
PATRICi22685935. VBINitHam61822_0014.

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141331.
KOiK01602.
OMAiYIPAVEF.
OrthoDBiEOG6RC3Q7.

Enzyme and pathway databases

BioCyciNHAM323097:GHP7-3811-MONOMER.
NHAM323097:GHP7-4116-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: X14Imported and X14 / DSM 10229Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: X14Imported.
    Plasmid: 1

Entry informationi

Entry nameiQ1QGD3_NITHX
AccessioniPrimary (citable) accession number: Q1QGD3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: June 24, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.