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Q1QGD3 (Q1QGD3_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABE64714.1
Gene names
Ordered Locus Names:Nham_3750 EMBL ABE64474.1, Nham_4050 EMBL ABE64714.1
Encoded onPlasmid 1 Ref.3 EMBL ABE64714.1
Plasmid pNITHX1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE64714.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter

Protein attributes

Sequence length141 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABE64714.1
   Technical termComplete proteome
Plasmid EMBL ABE64714.1
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1QGD3 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 087DBC9ED25E709C

FASTA14116,593
        10         20         30         40         50         60 
MRITQGCFSF LPDLTDEQIS KQIQYCLTQG WAVNIEFTDD PHPRNTYWDM WNLPMFDLKD 

        70         80         90        100        110        120 
AAGVLMELNE CRKVYGDRYI RMSAFDSSHG WESVKISFIV NRPKDEPGFR LERQESDNRN 

       130        140 
IRYTTTSYAV TARPEGQRYS S 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of chromosome of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 EMBL ABE64474.1 and X14 / DSM 10229.
[2]"Complete sequence of plasmid 1 of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.
[3]"Complete sequence of Plasmid1 of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: X14 EMBL ABE64714.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000319 Genomic DNA. Translation: ABE64474.1.
CP000320 Genomic DNA. Translation: ABE64714.1.
RefSeqYP_571546.1. NC_007959.1.
YP_578934.1. NC_007964.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323097.Nham_4050.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE64474; ABE64474; Nham_3750.
ABE64714; ABE64714; Nham_4050.
GeneID4025376.
4032487.
KEGGnha:Nham_3750.
nha:Nham_4050.
PATRIC22685935. VBINitHam61822_0014.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141331.
KOK01602.
OMAYIPAVEF.
OrthoDBEOG6RC3Q7.
ProtClustDBCLSK892105.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-3811-MONOMER.
NHAM323097:GHP7-4116-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1QGD3_NITHX
AccessionPrimary (citable) accession number: Q1QGD3
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: April 16, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)