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Q1QFR9 (Q1QFR9_NITHX) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABE64928.1
Gene names
Ordered Locus Names:Nham_4333 EMBL ABE64928.1
Encoded onPlasmid pNITHX1
OrganismNitrobacter hamburgensis (strain X14 / DSM 10229) [Complete proteome] [HAMAP] EMBL ABE64928.1
Taxonomic identifier323097 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeNitrobacter

Protein attributes

Sequence length108 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABE64928.1
   Technical termComplete proteome
Plasmid EMBL ABE64928.1
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q1QFR9 [UniParc].

Last modified May 16, 2006. Version 1.
Checksum: 6207A447D37627A5

FASTA10812,618
        10         20         30         40         50         60 
MAVQAYRSMK KYETFSYLPP MTPDQVRRQI AYAIAQGWNP AVEHTEKGTS AKTSYWYMWK 

        70         80         90        100 
LPLFGEQSVD AVMAEIEACH REFPDQLVRF LAYDNYSQSQ GMAFVVYR 

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References

[1]"Complete sequence of plasmid 1 of Nitrobacter hamburgensis X14."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Ivanova N., Ward B., Arp D., Klotz M., Stein L., O'Mullan G., Starkenburg S., Sayavedra L., Poret-Peterson A.T., Gentry M.E., Bruce D., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: X14 / DSM 10229.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000320 Genomic DNA. Translation: ABE64928.1.
RefSeqYP_571760.1. NC_007959.1.

3D structure databases

ProteinModelPortalQ1QFR9.
SMRQ1QFR9. Positions 3-108.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323097.Nham_4333.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE64928; ABE64928; Nham_4333.
GeneID4025656.
KEGGnha:Nham_4333.
PATRIC22686590. VBINitHam61822_0341.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141332.
KOK01602.
OMASAKESFW.
OrthoDBEOG6G20PM.

Enzyme and pathway databases

BioCycNHAM323097:GHP7-4399-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ1QFR9_NITHX
AccessionPrimary (citable) accession number: Q1QFR9
Entry history
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: July 9, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)