Q1QDM9 (GLND_PSYCK) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	Pcryo_0441

Organism

Psychrobacter cryohalolentis (strain K5) [Complete proteome] [HAMAP]

Taxonomic identifier

335284 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Psychrobacter › Psychrobacter cryohalolentis

Protein attributes

Sequence length	913 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP amino acid binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 913	913	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_1000022352

Sequences

	Sequence		Length	Mass (Da)
	Q1QDM9 [UniParc]. Last modified May 16, 2006. Version 1. Checksum: 1E1118BBFD987E10	FASTA	913	104,638
	10 20 30 40 50 60 MFNCDVTAID LTPMPLFSAD NMTTAFLSTD TSVVEKSLFG IPEWLLQIND DISRALERGV 70 80 90 100 110 120 NIRQLVSARA CVIDDLLIEL FKCFGLDKTD LALFATGGYG RGELSLHSDI DILLLMPHDI 130 140 150 160 170 180 NADTSSKIDN LVALLWDIGL EPALSVRSVS DCLEAALDHT IASALLEARL LIGNDALQNV 190 200 210 220 230 240 PHQIVNNQWS PRSFYDVKID EAKARYLQHN ATEYNLEPNI KTAPGGLRDI HIIGWVTKRY 250 260 270 280 290 300 FRVSKLYDLV QQNFLTEKEF DELSFSENYL WQIRHYLHEL TGRNENKLLF DYQREIAQLM 310 320 330 340 350 360 GYDTQTDDQP NAAVERFMRD YYRCAMQIST LSEMLTNHYY ETIIEAQLPD EERPKKQPIN 370 380 390 400 410 420 ARFNQVGDQI AMAHHRVFAQ HPESILEMFL LMGQYGIKNV RTHTLRALKI AARGIDQAYR 430 440 450 460 470 480 DNPTHQTLFL ANLKEQNYLF HRLRTMNRYG VLGNYIPAFA QVTGLMQYDL FHRYTVDAHT 490 500 510 520 530 540 LFLIRILHRF TDPHFYEDFP LVSSIFQRIE RKEILVLAAM FHDIAKGRGG NHSQLGEIES 550 560 570 580 590 600 IEFCLAHGMS TADANLVGWL TRYHLLMSMT AQKKDISDPE VVTLFADLVG NVTHLNHLYV 610 620 630 640 650 660 LTVADMNATN PQLWNSWRAT LMKQLYSQTR RILRADIDAP TNRQDMISAT RKQALVMLDN 670 680 690 700 710 720 VDNQHMNRDE VLRLWDDLGD EYFLREIAED ILWHTEAILN HPPIGRASNA DSPPLVVLRE 730 740 750 760 770 780 HRELALDAVQ VFVYTQDQVN LFAVTMAVFD QMNLDVLDAR IITATRDFAL DSYVLLDRSG 790 800 810 820 830 840 TLLVDSDSQQ ELKQRLIDAF KNPTAPKLTH KRIPRQLKHF DVATTINFDF NDASNQHIMS 850 860 870 880 890 900 LETLDQPGLL ARVGQVFLQQ QIEVHAARIT TLGERAEDMF YISDQNDQAL SADKLKTLKT 910 ALIDSLSVRN DRV

References

[1]

"Complete sequence of chromosome of Psychrobacter cryohalolentis K5." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Sims D.R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000323 Genomic DNA. Translation: ABE74224.1.
RefSeq	YP_579708.1. NC_007969.1.
3D structure databases
ProteinModelPortal	Q1QDM9.
ModBase	Search...
Protein-protein interaction databases
STRING	335284.Pcryo_0441.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE74224; ABE74224; Pcryo_0441.
GeneID	4034059.
KEGG	pcr:Pcryo_0441.
PATRIC	23060331. VBIPsyCry128170_0505.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261778.
KO	K00990.
OMA	SPKVWNA.
ProtClustDB	CLSK830629.
Enzyme and pathway databases
BioCyc	PCRY335284:GHE9-506-MONOMER.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR002912. ACT_dom. IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF01842. ACT. 1 hit. PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_PSYCK

Accession

Primary (citable) accession number: Q1QDM9

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	May 16, 2006
Last modified:	May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program