Q1QC40 (MAO1_PSYCK) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 47.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: NAD-dependent malic enzyme Short name=NAD-ME EC=1.1.1.38 | ||||
| Gene names |
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| Organism | Psychrobacter cryohalolentis (strain K5) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 335284 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Psychrobacter |
Protein attributes
| Sequence length | 560 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | (S)-malate + NAD+ = pyruvate + CO2 + NADH. HAMAP MF_01619 |
| Cofactor | Divalent metal cations. Prefers magnesium or manganese By similarity. |
| Subunit structure | Homotetramer By similarity. HAMAP MF_01619 |
| Sequence similarities | Belongs to the malic enzymes family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Metal-binding NAD |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | malate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | NAD binding Inferred from electronic annotation. Source: InterPro malate dehydrogenase (oxaloacetate-decarboxylating) activityInferred from electronic annotation. Source: EC metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 560 | 560 | NAD-dependent malic enzyme HAMAP MF_01619 | PRO_1000069535 | |||||
Sites | |||||||||
| Active site | 100 | 1 | Proton donor By similarity | ||||||
| Active site | 171 | 1 | Proton acceptor By similarity | ||||||
| Metal binding | 242 | 1 | Divalent metal cation By similarity | ||||||
| Metal binding | 243 | 1 | Divalent metal cation By similarity | ||||||
| Metal binding | 266 | 1 | Divalent metal cation By similarity | ||||||
| Binding site | 153 | 1 | NAD By similarity | ||||||
| Binding site | 266 | 1 | NAD By similarity | ||||||
| Binding site | 413 | 1 | NAD By similarity | ||||||
| Site | 266 | 1 | Important for activity By similarity | ||||||
Sequences
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References
| [1] | "Complete sequence of chromosome of Psychrobacter cryohalolentis K5." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Sims D.R., Gilna P., Schmutz J. Richardson P.Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K5. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000323 Genomic DNA. Translation: ABE74763.1. |
| RefSeq | YP_580247.1. NC_007969.1. |
3D structure databases | |
| ProteinModelPortal | Q1QC40. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q1QC40. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 4035727. |
| GenomeReviews | Gene locus Pcryo_0982 in contig CP000323_GR. |
| KEGG | pcr:Pcryo_0982. |
| NMPDR | fig|335284.3.peg.343. |
| PATRIC | 23061455. VBIPsyCry128170_1054. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0281. |
| HOGENOM | HBG289821. |
| OMA | QDNNETL. |
| PhylomeDB | Q1QC40. |
| ProtClustDB | PRK13529. |
Enzyme and pathway databases | |
| BioCyc | PCRY335284:PCRYO_0982-MONOMER. |
Family and domain databases | |
| HAMAP | MF_01619. NAD_malic_enz. [Tree] |
| InterPro | IPR015884. Malic_enzyme_CS. IPR012301. Malic_N. IPR012302. Malic_NAD-bd. IPR001891. Malic_OxRdtase. IPR016040. NAD(P)-bd_dom. IPR023667. NAD_malic_enz_proteobac. [Graphical view] |
| Gene3D | G3DSA:3.40.50.10380. G3DSA:3.40.50.10380. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K00027. |
| Pfam | PF00390. malic. 1 hit. PF03949. Malic_M. 1 hit. [Graphical view] |
| PIRSF | PIRSF000106. ME. 1 hit. |
| PRINTS | PR00072. MALOXRDTASE. |
| SMART | SM00919. Malic_M. 1 hit. [Graphical view] |
| PROSITE | PS00331. MALIC_ENZYMES. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | MAO1_PSYCK | ||||||||
| Accession | Primary (citable) accession number: Q1QC40 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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