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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Pcryo_2495

Organism
Psychrobacter cryohalolentis (strain K5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. magnesium ion binding Source: InterPro
  3. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPCRY335284:GHE9-2571-MONOMER.

Protein family/group databases

REBASEi12273. PcrKORF2496P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
ORF Names:Pcryo_2495Imported
Encoded oniPlasmid 1Imported
OrganismiPsychrobacter cryohalolentis (strain K5)Imported
Taxonomic identifieri335284 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter
ProteomesiUP000002425: Plasmid 1

Family & Domainsi

Phylogenomic databases

eggNOGiNOG67783.
HOGENOMiHOG000015232.
KOiK01155.
OMAiDIWIRPD.
OrthoDBiEOG6W71XN.

Family and domain databases

InterProiIPR009528. Restrct_endonuc_II_BsuBI_C.
[Graphical view]
PfamiPF06616. BsuBI_PstI_RE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1Q7R8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTQDDHIEA ALQIIACLGL PTAQYNERSA LTLLALLDLS PGKSWTQVKS
60 70 80 90 100
PLMGITPIMN WAREHYSKDY APNTRETVRR QTMHQFCDAG IALYNPDKPD
110 120 130 140 150
RPVNSPKAVY QIEPHVLTLL RTYGTTSWHS HLERYLADRT SLVERYAKER
160 170 180 190 200
EQNRIPVRIA DGKEITLSPG IHSELIKDII EDFAERFAPN SILIYAGDTE
210 220 230 240 250
KKWGYFDKEL LKELNVDVGS HGKMPDVVLH YTEKNWLLLV ESVTSHGPVD
260 270 280 290 300
GKRYEELSKL FSESTAGLVY VTAFPNRALM GRYLSEIAWE TEVWVADAPS
310
HLIHFNGVRF LGPYSP
Length:316
Mass (Da):35,966
Last modified:May 16, 2006 - v1
Checksum:i6C9A9EFE9496A15F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000324 Genomic DNA. Translation: ABE76272.1.
RefSeqiYP_579258.1. NC_007968.1.

Genome annotation databases

EnsemblBacteriaiABE76272; ABE76272; Pcryo_2495.
GeneIDi4033490.
KEGGipcr:Pcryo_2495.
PATRICi23059358. VBIPsyCry128170_0033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000324 Genomic DNA. Translation: ABE76272.1.
RefSeqiYP_579258.1. NC_007968.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi12273. PcrKORF2496P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE76272; ABE76272; Pcryo_2495.
GeneIDi4033490.
KEGGipcr:Pcryo_2495.
PATRICi23059358. VBIPsyCry128170_0033.

Phylogenomic databases

eggNOGiNOG67783.
HOGENOMiHOG000015232.
KOiK01155.
OMAiDIWIRPD.
OrthoDBiEOG6W71XN.

Enzyme and pathway databases

BioCyciPCRY335284:GHE9-2571-MONOMER.

Family and domain databases

InterProiIPR009528. Restrct_endonuc_II_BsuBI_C.
[Graphical view]
PfamiPF06616. BsuBI_PstI_RE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Plasmid1 of Psychrobacter cryohalolentis K5."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Sims D.R., Gilna P., Schmutz J.
    , Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Richardson P.
    Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K5Imported.
    Plasmid: 1

Entry informationi

Entry nameiQ1Q7R8_PSYCK
AccessioniPrimary (citable) accession number: Q1Q7R8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: March 4, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.