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Protein
Submitted name:

GLI2 transcription factor

Gene

GLI2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
GLI2 transcription factorImported
Submitted name:
Zinc finger protein GLI2Imported
Gene namesi
Name:GLI2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

HGNCiHGNC:4318. GLI2.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA28721.

PTM / Processingi

Proteomic databases

PaxDbiQ1PSW9.

Expressioni

Gene expression databases

ExpressionAtlasiQ1PSW9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000354586.

Structurei

3D structure databases

ProteinModelPortaliQ1PSW9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK16798.

Sequencei

Sequence statusi: Fragment.

Q1PSW9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METSASATAS EKQEAKSGIL EAAGFPDPGK KASPLVVAAA AAAAVAAQGV
60 70 80
PQHLLPPFHA PLPIDMRHQE GRYHYEPHSV HG
Length:82
Mass (Da):8,504
Last modified:May 16, 2006 - v1
Checksum:iE92C6B879545D146
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei82 – 821Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016764 Genomic DNA. No translation available.
AC017033 Genomic DNA. No translation available.
KF510212 Genomic DNA. No translation available.
KF510752 Genomic DNA. No translation available.
DQ004397 mRNA. Translation: AAY58316.1.
DQ004398 mRNA. Translation: AAY58317.1.
RefSeqiNP_005261.2. NM_005270.4.
UniGeneiHs.111867.

Genome annotation databases

EnsembliENST00000418323; ENSP00000398992; ENSG00000074047.
GeneIDi2736.
KEGGihsa:2736.
UCSCiuc061nko.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016764 Genomic DNA. No translation available.
AC017033 Genomic DNA. No translation available.
KF510212 Genomic DNA. No translation available.
KF510752 Genomic DNA. No translation available.
DQ004397 mRNA. Translation: AAY58316.1.
DQ004398 mRNA. Translation: AAY58317.1.
RefSeqiNP_005261.2. NM_005270.4.
UniGeneiHs.111867.

3D structure databases

ProteinModelPortaliQ1PSW9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000354586.

Proteomic databases

PaxDbiQ1PSW9.

Protocols and materials databases

DNASUi2736.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000418323; ENSP00000398992; ENSG00000074047.
GeneIDi2736.
KEGGihsa:2736.
UCSCiuc061nko.1. human.

Organism-specific databases

CTDi2736.
HGNCiHGNC:4318. GLI2.
PharmGKBiPA28721.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK16798.

Miscellaneous databases

GenomeRNAii2736.

Gene expression databases

ExpressionAtlasiQ1PSW9. baseline and differential.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Generation and annotation of the DNA sequences of human chromosomes 2 and 4."
    Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H.
    , Sun H., Bradshaw-Cordum H., Ali J., Carter J., Cordes M., Harris A., Isak A., van Brunt A., Nguyen C., Du F., Courtney L., Kalicki J., Ozersky P., Abbott S., Armstrong J., Belter E.A., Caruso L., Cedroni M., Cotton M., Davidson T., Desai A., Elliott G., Erb T., Fronick C., Gaige T., Haakenson W., Haglund K., Holmes A., Harkins R., Kim K., Kruchowski S.S., Strong C.M., Grewal N., Goyea E., Hou S., Levy A., Martinka S., Mead K., McLellan M.D., Meyer R., Randall-Maher J., Tomlinson C., Dauphin-Kohlberg S., Kozlowicz-Reilly A., Shah N., Swearengen-Shahid S., Snider J., Strong J.T., Thompson J., Yoakum M., Leonard S., Pearman C., Trani L., Radionenko M., Waligorski J.E., Wang C., Rock S.M., Tin-Wollam A.-M., Maupin R., Latreille P., Wendl M.C., Yang S.-P., Pohl C., Wallis J.W., Spieth J., Bieri T.A., Berkowicz N., Nelson J.O., Osborne J., Ding L., Meyer R., Sabo A., Shotland Y., Sinha P., Wohldmann P.E., Cook L.L., Hickenbotham M.T., Eldred J., Williams D., Jones T.A., She X., Ciccarelli F.D., Izaurralde E., Taylor J., Schmutz J., Myers R.M., Cox D.R., Huang X., McPherson J.D., Mardis E.R., Clifton S.W., Warren W.C., Chinwalla A.T., Eddy S.R., Marra M.A., Ovcharenko I., Furey T.S., Miller W., Eichler E.E., Bork P., Suyama M., Torrents D., Waterston R.H., Wilson R.K.
    Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "A potential role of alternative splicing in the regulation of the transcriptional activity of human GLI2 in gonadal tissues."
    Speek M., Njunkova O., Pata I., Valdre E., Kogerman P.
    BMC Mol. Biol. 7:13-13(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: OvaryImported.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ1PSW9_HUMAN
AccessioniPrimary (citable) accession number: Q1PSW9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: June 8, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.