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Protein
Submitted name:

GLIS family zinc finger 3 transcript variant TS2

Gene

GLIS3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GLIS family zinc finger 3 transcript variant TS2Imported
Submitted name:
GLIS family zinc finger 3 transcript variant TS3Imported
Submitted name:
GLIS family zinc finger 3 transcript variant TS4Imported
Submitted name:
GLIS family zinc finger 3 transcript variant TS5Imported
Submitted name:
Zinc finger protein GLIS3Imported
Gene namesi
Name:GLIS3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 9

Organism-specific databases

HGNCiHGNC:28510. GLIS3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134878768.

PTM / Processingi

Proteomic databases

PeptideAtlasiQ1PHJ8.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000371398.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK09232.

Family and domain databases

InterProiIPR030405. GLIS3.
[Graphical view]
PANTHERiPTHR19818:SF83. PTHR19818:SF83. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q1PHJ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGRSCSMSL HRTSGTPQGP RMVSGHHIPA IRAHSGTPGP SPCGSTSSPT
60 70 80 90 100
MASLANNLHL KMPSGGGMAP QNNVAESRIH LPALSPRRQM LTNGKPRFQV
110 120 130 140 150
TQAGGMSGSH TLKPKQQEFG SPFPPNPGKG ALGFGPQCKS IGKGSCNNLV
160 170 180 190 200
VTSSPMMVQR LGLISPPASQ VSTACNQISP SLQRAMNAAN LNIPPSDTRS
210 220 230 240
LISRESLAST TLSLTESQSA SSMKQEWSQG YRALPSLSNH GSQN
Length:244
Mass (Da):25,488
Last modified:May 16, 2006 - v1
Checksum:i544C5C19D49E5344
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei244 – 2441Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133283 Genomic DNA. No translation available.
AL137071 Genomic DNA. No translation available.
AL158012 Genomic DNA. No translation available.
AL162419 Genomic DNA. No translation available.
AL359095 Genomic DNA. No translation available.
KF458892 Genomic DNA. No translation available.
KF458894 Genomic DNA. No translation available.
DQ438886 mRNA. Translation: ABE66438.1.
DQ438887 mRNA. Translation: ABE66439.1.
DQ438888 mRNA. Translation: ABE66440.1.
DQ438889 mRNA. Translation: ABE66441.1.
RefSeqiNP_001035878.1. NM_001042413.1.
UniGeneiHs.162125.
Hs.644570.

Genome annotation databases

EnsembliENST00000477901; ENSP00000417794; ENSG00000107249.
ENST00000481827; ENSP00000417883; ENSG00000107249.
GeneIDi169792.
KEGGihsa:169792.
UCSCiuc064rxz.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133283 Genomic DNA. No translation available.
AL137071 Genomic DNA. No translation available.
AL158012 Genomic DNA. No translation available.
AL162419 Genomic DNA. No translation available.
AL359095 Genomic DNA. No translation available.
KF458892 Genomic DNA. No translation available.
KF458894 Genomic DNA. No translation available.
DQ438886 mRNA. Translation: ABE66438.1.
DQ438887 mRNA. Translation: ABE66439.1.
DQ438888 mRNA. Translation: ABE66440.1.
DQ438889 mRNA. Translation: ABE66441.1.
RefSeqiNP_001035878.1. NM_001042413.1.
UniGeneiHs.162125.
Hs.644570.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000371398.

Proteomic databases

PeptideAtlasiQ1PHJ8.

Protocols and materials databases

DNASUi169792.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000477901; ENSP00000417794; ENSG00000107249.
ENST00000481827; ENSP00000417883; ENSG00000107249.
GeneIDi169792.
KEGGihsa:169792.
UCSCiuc064rxz.1. human.

Organism-specific databases

CTDi169792.
HGNCiHGNC:28510. GLIS3.
PharmGKBiPA134878768.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118771.
KOiK09232.

Miscellaneous databases

ChiTaRSiGLIS3. human.
GenomeRNAii169792.

Family and domain databases

InterProiIPR030405. GLIS3.
[Graphical view]
PANTHERiPTHR19818:SF83. PTHR19818:SF83. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 9."
    Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L.
    , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I.
    Nature 429:369-374(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Mutations in GLIS3 are responsible for a rare syndrome with neonatal diabetes mellitus and congenital hypothyroidism."
    Senee V., Chelala C., Duchatelet S., Feng D., Blanc H., Cossec J.-C., Charon C., Nicolino M., Boileau P., Cavener D.R., Bougneres P., Taha D., Julier C.
    Nat. Genet. 38:682-687(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiQ1PHJ8_HUMAN
AccessioniPrimary (citable) accession number: Q1PHJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 16, 2006
Last sequence update: May 16, 2006
Last modified: July 6, 2016
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.