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Protein
Submitted name:

ABC-type transport system periplasmic component

Gene

SKA58_17667

Organism
Sphingomonas sp. (strain SKA58)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
ABC-type transport system periplasmic componentImported
Gene namesi
ORF Names:SKA58_17667Imported
OrganismiSphingomonas sp. (strain SKA58)Imported
Taxonomic identifieri314266 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Interactioni

Protein-protein interaction databases

STRINGi314266.SKA58_17667.

Family & Domainsi

Family and domain databases

InterProiIPR003399. Mce-related.
[Graphical view]
PfamiPF02470. MCE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1NDE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METRSNHVLV GTVTLLLLAA IMIAAFWFSR LSQGDNKEYD IFFKQSVSGL
60 70 80 90 100
AKGSGVNYAG VPSGQVEKIE LWKRDPSFVK VRISVRDGTP ILQGTTATIQ
110 120 130 140 150
GVGFTGVSEI VLDGAVKGAP PIQCPAQNAP AACPDGVPVI PTKPGALGEL
160 170 180 190 200
LNNAPQLLER LSTLTERLTE LLDDKNQQSI AGILANVERI SGSLADRSPE
210 220 230 240 250
IAATLAEARI AVQRTGVAVE QIGKLAATTD SLLNEQGKPL MADLRKTVQS
260 270 280 290 300
ATRSIDTLDK TIGEAQPGVK SFSTQTMPEV NQLVRDLREM SRAFRGVAEK
310 320
LDQQGAGSIV GSPKLPDYKP
Length:320
Mass (Da):34,038
Last modified:May 30, 2006 - v1
Checksum:i09C8521BE12AEBB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQG01000006 Genomic DNA. Translation: EAT08941.1.
RefSeqiWP_009823274.1. NZ_CH959307.1.

Genome annotation databases

EnsemblBacteriaiEAT08941; EAT08941; SKA58_17667.
PATRICi29451025. VBISphSp87348_2137.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAQG01000006 Genomic DNA. Translation: EAT08941.1.
RefSeqiWP_009823274.1. NZ_CH959307.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi314266.SKA58_17667.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEAT08941; EAT08941; SKA58_17667.
PATRICi29451025. VBISphSp87348_2137.

Family and domain databases

InterProiIPR003399. Mce-related.
[Graphical view]
PfamiPF02470. MCE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SKA58Imported.

Entry informationi

Entry nameiQ1NDE4_SPHSS
AccessioniPrimary (citable) accession number: Q1NDE4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: June 24, 2015
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.