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Protein

60S ribosome subunit biogenesis protein nip7

Gene

nip7

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-binding
Biological processRibosome biogenesis

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosome subunit biogenesis protein nip7
Gene namesi
Name:nip7
ORF Names:SPCC320.11c, SPCC330.18
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC320.11c
PomBaseiSPCC320.11c nip7

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003431631 – 18060S ribosome subunit biogenesis protein nip7Add BLAST180

Proteomic databases

MaxQBiQ1MTQ9
PaxDbiQ1MTQ9
PRIDEiQ1MTQ9

PTM databases

iPTMnetiQ1MTQ9

Interactioni

Subunit structurei

Interacts with pre-ribosome complex.By similarity

Protein-protein interaction databases

STRINGi4896.SPCC320.11c.1

Structurei

3D structure databases

ProteinModelPortaliQ1MTQ9
SMRiQ1MTQ9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini94 – 170PUAPROSITE-ProRule annotationAdd BLAST77

Sequence similaritiesi

Belongs to the NIP7 family.Curated

Phylogenomic databases

HOGENOMiHOG000168475
InParanoidiQ1MTQ9
KOiK07565
OMAiVVKAHVG
OrthoDBiEOG092C4X4T
PhylomeDBiQ1MTQ9

Family and domain databases

Gene3Di2.30.130.10, 1 hit
InterProiView protein in InterPro
IPR002478 PUA
IPR015947 PUA-like_sf
IPR036974 PUA_sf
IPR005155 Rbsml_synth_fac_NIP7-like
IPR016686 Ribosomal_synth_fac_NIP7
PfamiView protein in Pfam
PF03657 UPF0113, 1 hit
PIRSFiPIRSF017190 Rbsml_synth_fac_NIP7, 1 hit
SMARTiView protein in SMART
SM00359 PUA, 1 hit
SUPFAMiSSF88697 SSF88697, 1 hit
PROSITEiView protein in PROSITE
PS50890 PUA, 1 hit

Sequencei

Sequence statusi: Complete.

Q1MTQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRPLTHEETK TFFEKLAQYI GKNITHLIDR PDDPHCFRLQ KDRVYYVSER
60 70 80 90 100
AMKMATSVAR QNLMSLGICF GKFTKTNKFR LHITALDYIA QYARYKIWVK
110 120 130 140 150
SNGEMPFLYG NHVLKAHVGR ITDDTPQHQG VVIYSMNDTP LGFGVTARST
160 170 180
LELRRLEPTA IVAFHQADVG EYLRDEDTLF
Length:180
Mass (Da):20,860
Last modified:August 21, 2007 - v1
Checksum:i3BD74E9686E9D244
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA Translation: CAA20923.1
PIRiT41300
RefSeqiNP_587718.1, NM_001022713.2

Genome annotation databases

EnsemblFungiiSPCC320.11c.1; SPCC320.11c.1:pep; SPCC320.11c
GeneIDi2539255
KEGGispo:SPCC320.11c

Similar proteinsi

Entry informationi

Entry nameiNIP7_SCHPO
AccessioniPrimary (citable) accession number: Q1MTQ9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: August 21, 2007
Last modified: May 23, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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