Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q1MSG4

- Q1MSG4_LAWIP

UniProt

Q1MSG4 - Q1MSG4_LAWIP

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Superoxide dismutase [Cu-Zn]

Gene

sodC

Organism
Lawsonia intracellularis (strain PHE/MN1-00)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Note: Binds 1 copper ion per subunit.UniRule annotation
  • Note: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciLINT363253:GH6E-5-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodCImported
Ordered Locus Names:LI0005Imported
OrganismiLawsonia intracellularis (strain PHE/MN1-00)Imported
Taxonomic identifieri363253 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeLawsonia
ProteomesiUP000002430: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi363253.LI0005.

Structurei

3D structure databases

ProteinModelPortaliQ1MSG4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263449.
KOiK04565.
OMAiDHPKPLG.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q1MSG4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKIKLFFVTS IVTISLLTSI TSVVLACSVT SEVHMIDDNG IKQSIGTVTF
60 70 80 90 100
TDTDKGLQIK TDLKGLPAGE HGFHIHEGGS CGPAEHDGHL TAGLQAHGHY
110 120 130 140 150
DPDKTGKHEG PLGNGHKGDL PRLVVKADGI AKETLLAPRL TVKEIKGRTV
160 170 180
MIHAGGDNYS DKPLPLGGGG ARIACGVIPN
Length:180
Mass (Da):18,827
Last modified:May 30, 2006 - v1
Checksum:iB2D8B665BAD0D665
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180252 Genomic DNA. Translation: CAJ54061.1.
RefSeqiWP_011526088.1. NC_008011.1.
YP_594383.1. NC_008011.1.

Genome annotation databases

GeneIDi4059803.
KEGGilip:LI0005.
PATRICi22303299. VBILawInt40445_0005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180252 Genomic DNA. Translation: CAJ54061.1 .
RefSeqi WP_011526088.1. NC_008011.1.
YP_594383.1. NC_008011.1.

3D structure databases

ProteinModelPortali Q1MSG4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 363253.LI0005.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4059803.
KEGGi lip:LI0005.
PATRICi 22303299. VBILawInt40445_0005.

Phylogenomic databases

eggNOGi COG2032.
HOGENOMi HOG000263449.
KOi K04565.
OMAi DHPKPLG.
OrthoDBi EOG6K13RS.

Enzyme and pathway databases

BioCyci LINT363253:GH6E-5-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
PS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of Lawsonia intracellularis: the causative agent of proliferative enteropathy."
    Kaur K., Zhang Q., Beckler D., Munir S., Li L., Kinsley K., Herron L., Peterson A., May B., Singh S., Gebhart C., Kapur V.
    Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PHE/MN1-00Imported.

Entry informationi

Entry nameiQ1MSG4_LAWIP
AccessioniPrimary (citable) accession number: Q1MSG4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: November 26, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3