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Protein
Submitted name:

Alpha-amylase

Gene

amyA

Organism
Lawsonia intracellularis (strain PHE/MN1-00)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciLINT363253:GH6E-341-MONOMER.

Protein family/group databases

CAZyiGH57. Glycoside Hydrolase Family 57.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:LI0331Imported
OrganismiLawsonia intracellularis (strain PHE/MN1-00)Imported
Taxonomic identifieri363253 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeLawsonia
ProteomesiUP000002430: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi363253.LI0331.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.
OrthoDBiEOG6F81Q4.

Family and domain databases

Gene3Di3.20.110.10. 2 hits.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

Q1MRI9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSICFYFQV HQPFRLRNYS FFEIGVNPFY EDEEHNRHVM HKVARGCYLP
60 70 80 90 100
MNRLLLKLIH QYDQKFKISF SISGTALEQF ERYSPEVITT FQELADTGCV
110 120 130 140 150
EFLTETYYHS LAFMFSPYEF KEQVTLHQQR IKELFKITPH VFRNTELIYT
160 170 180 190 200
NELAKCIENM GYIGILAEGA DHILNWRSPN YVYRPLGCNN LKLLLKNYRL
210 220 230 240 250
SDDIAFRFSN KDWIGYPLTA ERFTQWINDS GGSNETINLF MDYETFGEHQ
260 270 280 290 300
WADTGIFAFM EALPHYLLQS NNQFLTPTEV ATTFTPVAEL DIPYPVSWAD
310 320 330 340 350
TERDLTAWTG NEMQQDAIER LYRLEPLVRE YGCEQILNTW KRLQTSDHFY
360 370 380 390 400
YMCTKWFSDG DVHKYFNPYP SPYDAYINYM NILTDLESRI TLQPNSNTYS
410 420
NQHTMKAHYN DVTPLLSPTT CFNNLQNL
Length:428
Mass (Da):50,621
Last modified:May 30, 2006 - v1
Checksum:iD0C1FE1AF49842BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180252 Genomic DNA. Translation: CAJ54387.1.
RefSeqiWP_011526416.1. NC_008011.1.
YP_594708.1. NC_008011.1.

Genome annotation databases

GeneIDi4060347.
KEGGilip:LI0331.
PATRICi22304047. VBILawInt40445_0368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM180252 Genomic DNA. Translation: CAJ54387.1.
RefSeqiWP_011526416.1. NC_008011.1.
YP_594708.1. NC_008011.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi363253.LI0331.

Protein family/group databases

CAZyiGH57. Glycoside Hydrolase Family 57.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4060347.
KEGGilip:LI0331.
PATRICi22304047. VBILawInt40445_0368.

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.
OrthoDBiEOG6F81Q4.

Enzyme and pathway databases

BioCyciLINT363253:GH6E-341-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 2 hits.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of Lawsonia intracellularis: the causative agent of proliferative enteropathy."
    Kaur K., Zhang Q., Beckler D., Munir S., Li L., Kinsley K., Herron L., Peterson A., May B., Singh S., Gebhart C., Kapur V.
    Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PHE/MN1-00Imported.

Entry informationi

Entry nameiQ1MRI9_LAWIP
AccessioniPrimary (citable) accession number: Q1MRI9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 30, 2006
Last sequence update: May 30, 2006
Last modified: February 4, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.