Q1MKR4 (Q1MKR4_RHIL3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycine--tRNA ligase alpha subunit HAMAP-Rule MF_00254
EC=6.1.1.14 HAMAP-Rule MF_00254

Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP-Rule MF_00254

Gene names

Name:	glyQ HAMAP-Rule MF_00254 EMBL CAK06440.1
Ordered Locus Names:	RL0943 EMBL CAK06440.1

Organism

Rhizobium leguminosarum bv. viciae (strain 3841) [Complete proteome] [HAMAP] EMBL CAK06440.1

Taxonomic identifier

216596 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium leguminosarum › Rhizobium leguminosarum bv. viciae

Protein attributes

Sequence length	318 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP-Rule MF_00254 SAAS SAAS002310
Subunit structure	Tetramer of two alpha and two beta subunits By similarity. HAMAP-Rule MF_00254
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00254 SAAS SAAS002310.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00254

Ontologies

Keywords
Biological process	Protein biosynthesis HAMAP-Rule MF_00254 SAAS SAAS002310
Cellular component	Cytoplasm HAMAP-Rule MF_00254 SAAS SAAS002310
Ligand	ATP-binding HAMAP-Rule MF_00254 SAAS SAAS002310 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase HAMAP-Rule MF_00254 SAAS SAAS002310 EMBL CAK06440.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: HAMAP glycine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1MKR4 [UniParc]. Last modified May 30, 2006. Version 1. Checksum: 94B79517E5A367EC	FASTA	318	35,747
	10 20 30 40 50 60 MSAIPDHMNP KRSFQALILT LHNYWADKGC AVLQPYDMEV GAGTFHPATT LRALGPKPWK 70 80 90 100 110 120 AAYVQPSRRP SDGRYGENPN RLQHYYQYQV ILKPNPPNLQ ELYLGSLAAI GLDPLLHDIR 130 140 150 160 170 180 FVEDDWESPT LGAWGLGWEC WCDGMEVSQF TYFQQVCGIE CSPVAGELTY GLERLAMYVQ 190 200 210 220 230 240 GVDNVYDLNF NGRDGDEKIS YGDVFLQAEQ EYSRHNFEFA NTEMLHRHFV DAEKECRALL 250 260 270 280 290 300 DAGAPGDNAN QRLHKCVFPA YDQCIKASHV FNLLDARGVI SVTERQSYIL RVRTLAKACG 310 EAFLLTDAGG VNLSKEAA

References

[1]

"The genome of Rhizobium leguminosarum has recognizable core and accessory components." Young J.W., Crossman L.C., Johnston A.W.B., Thomson N.R., Ghazoui Z.F., Hull K.H., Wexler M., Curson A.R.J., Todd J.D., Poole P.S., Mauchline T.H., East A.K., Quail M.A., Churcher C., Arrowsmith C., Cherevach A., Chillingworth T., Clarke K. , Cronin A., Davis P., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., Whitehead S., Parkhill J. Genome Biol. 7:R34-R34(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3841 EMBL CAK06440.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM236080 Genomic DNA. Translation: CAK06440.1.
RefSeq	YP_766555.1. NC_008380.1.
3D structure databases
ProteinModelPortal	Q1MKR4.
SMR	Q1MKR4. Positions 13-307.
ModBase	Search...
Protein-protein interaction databases
STRING	216596.RL0943.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAK06440; CAK06440; RL0943.
GeneID	4402935.
KEGG	rle:RL0943.
PATRIC	23138323. VBIRhiLeg32091_2106.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0752.
HOGENOM	HOG000264291.
KO	K01878.
OMA	CVILQPY.
ProtClustDB	PRK09348.
Family and domain databases
HAMAP	MF_00254. Gly_tRNA_synth_alpha.
InterPro	IPR006194. Gly-tRNA-synth_heterodimer. IPR002310. Gly-tRNA_ligase_asu. [Graphical view]
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
TIGRFAMs	TIGR00388. glyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q1MKR4_RHIL3

Accession

Primary (citable) accession number: Q1MKR4

Entry history

Integrated into UniProtKB/TrEMBL:	May 30, 2006
Last sequence update:	May 30, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)